| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1935 |
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| Symbol | |
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| ID | 5744614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2390872 |
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| End bp | 2392257 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641293031 |
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| Product | sugar (glycoside-Pentoside-hexuronide) transporter |
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| Protein accession | YP_001559042 |
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| Protein GI | 160880074 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATCAAT TACATAAATC CAACCGTTTT ACCTTTGGAA TTGGAACCAT CGGTAGAGAT
ATGGTCTATT CGCTGATCAG CATGTATTTA ACGTTTTATC TTACTGATGT CATCGAAGTT
TCTACCAAAG TCCTTTGGTG GATTACCGGT ATTACTTTAC TTTGCCGTGT TTTTGACGCT
TTTAATGATC CTATTATGGG ACTTATTGTG GACAATACCC ATTCTAGATT TGGTAAATTC
AAGCCTTGGA TTGCGTTAGG TGCAGTATTG TCTAGTATTT TTACTGTCCT TCTTTTTACG
GATTTCCATA CAAAAGGATC AGCATTTGTA ATACTTTATA CTATACTCTA TCTATCTTGG
GGAATTAGCT TTACCATTAA CGATATTTCT TACTGGTCGA TGCTACCATC CTTAAGTCTG
TTACAGAGTG AGCGGGAGAA AATTGGCTCA ATCGCACGTA TTTGCGCAAA TATCGGTCTG
TTCTTTGTGG TTGCAGGCAT TGTACCTATT ACTAAAGCAT GGGGTACTTC CCTCGACAGT
TTGCCAAAGG CATATTTTTA CTTCTCTTTA CTAGTGGTAG CAATTATGTT GGCAGGCCAG
ATGATTACAC TATTCGGAGT CCGGGAGTCC CATCAAATTA AAGAACAAAA GCAGCATACC
TCCCTAAAAG AATTACTTTT TGTAATTATA AAAAATGACC AACTTACTAT TACCGCTGTT
GCTATGGCTT TATTTATGAT TGGTTATGTC ACAACCACCA GTTTCGGAAT TTATTTTTTC
AAATATGCAT ATGGCAATGA AGATATGTAC GCGATCTTTG CCCTAATCCT AGGTGTGTCC
CAGATTGCTG CACTATCTAT CTTTCCGATG CTTGGGAAAC GCTATGAGCG CAAAACCTTG
TATACCTTTT CTATCATACT TGTGTTAATT GGTTATCTTT TGTTTTTCTT CTCTTCAAAT
CACAATATGA TTTTGATTGG TATTTCCGGT GTCTTGATAT TTGTAGGGCA AGCTTTTGTT
CAGATTATGA TGTTAATGTT TCTAGCTGAT TCAGTGGATT ATGGCCATTG GAAGCTTGGA
AAACGTAATG ATTCGATATC CTTTTCTTTG CAGCCTTTTA TTAATAAAAT TGGAGGAGCT
GTTGCAAATG GTATCGTAAC TGTGATTGTT ATTGTTTCCG GAATTAAGAA TGCATCTTCT
GCTAAAGATG TTACTTCTGG TGGGCTATTG ATGATGAAAA TAGCCATGCT TTTGTTCCCG
CTTCTATGCA TACTATGTAG TTATATTCTT TACCGTAGTA AATACAAGAT TGACCGTAAA
CTACATAATC AAATCTTACA AGATCTTGCC GAGCGTGGTG AATTGAATAC AGTAGAATCA
GATTAA
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| Protein sequence | MNQLHKSNRF TFGIGTIGRD MVYSLISMYL TFYLTDVIEV STKVLWWITG ITLLCRVFDA
FNDPIMGLIV DNTHSRFGKF KPWIALGAVL SSIFTVLLFT DFHTKGSAFV ILYTILYLSW
GISFTINDIS YWSMLPSLSL LQSEREKIGS IARICANIGL FFVVAGIVPI TKAWGTSLDS
LPKAYFYFSL LVVAIMLAGQ MITLFGVRES HQIKEQKQHT SLKELLFVII KNDQLTITAV
AMALFMIGYV TTTSFGIYFF KYAYGNEDMY AIFALILGVS QIAALSIFPM LGKRYERKTL
YTFSIILVLI GYLLFFFSSN HNMILIGISG VLIFVGQAFV QIMMLMFLAD SVDYGHWKLG
KRNDSISFSL QPFINKIGGA VANGIVTVIV IVSGIKNASS AKDVTSGGLL MMKIAMLLFP
LLCILCSYIL YRSKYKIDRK LHNQILQDLA ERGELNTVES D
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