| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1644 |
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| Symbol | |
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| ID | 5744465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 2025880 |
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| End bp | 2026923 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292744 |
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| Product | D-alanine--D-alanine ligase domain-containing protein |
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| Protein accession | YP_001558755 |
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| Protein GI | 160879787 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAATG ATGCAAATGG CAGCTTGGGA GATGAAGCTG ACCCTTATTC CAAACTACGG
GTTGGAATAA CTTATAATTT AAAGAAAGGG ATTCGTACCG AAGTCATTGA TGCAGAAGCT
GAATATGACA GCATCGATAC GGTTCTAGCC ATCAAAAACG CTTTAGAATG TGACAATTGC
CACATAGAAT TAATGGAGGC AGATACTGAT TTGCCCAAAC GGCTGAAAGA AACGCCGGTC
GATATTGTGT TTAACATAGC AGAAGGGTTA AAAGGAAGAG GCCGAGAAGC TGAGGTTCCT
GCAGTCCTTA ATATGTTTAA CATTCCATTT ACCGGTTCGG ACGAAACAAC CCTATGCCTT
GCACTAGATA AGGCACTTTG TAAACGAGTT TTATCCACCT ATCGCATCAG AACACCGAAA
TACCGAGTGT TTACCAAAGA CGATAATCGC CTTAATACTA ACTTTTCTTT TCCATGCATC
GTAAAGCCAA ATGCAGAAGG TTCCAGTAAA GGTATCTCCG ATATTTGTAT TGCTACGAAT
AAGGAAGAGT TGAAAACACT CGTAACAGAT AATATCAAGG CTTATGGCCA GGATATGTTA
GTGGAAGAAT ACATCGATGG TAGAGAATTT ACTGTTGGCG TACTTGGAAA TGGCGATGAT
GTTCATGTAT TCTCCCCTAT GGAAATTATC TATCTCAAGA AAAATAAATT TAATATTTAC
AGCTTTAATG TTAAGCAAGA TTATAAAAAA TTAATTCGCT ATGAATGCCC ATCGAAACTT
GATCCTGATA TCGAAGAGGA AATGGTTTTC ATGGCTAAAA AGATATTTAA AGTCCTAAGT
TGCCACGATT TTTCCAGAAT CGATTTTAGG CTAAATTCAG AGGGAAAACC TTATTTTATC
GAAATAAATC CTCTCCCTGG TTTGGCTCCT GGTTATAGCG ACTTTCCAAT GCTGGCTGAG
TTTTGTGGAA TGGACTATGT TACATTAGTT CGCAGTATTC TAAGAAACGC ACTCCATCGG
AATGGTCTTC CATTTCAAAT CTAA
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| Protein sequence | MENDANGSLG DEADPYSKLR VGITYNLKKG IRTEVIDAEA EYDSIDTVLA IKNALECDNC
HIELMEADTD LPKRLKETPV DIVFNIAEGL KGRGREAEVP AVLNMFNIPF TGSDETTLCL
ALDKALCKRV LSTYRIRTPK YRVFTKDDNR LNTNFSFPCI VKPNAEGSSK GISDICIATN
KEELKTLVTD NIKAYGQDML VEEYIDGREF TVGVLGNGDD VHVFSPMEII YLKKNKFNIY
SFNVKQDYKK LIRYECPSKL DPDIEEEMVF MAKKIFKVLS CHDFSRIDFR LNSEGKPYFI
EINPLPGLAP GYSDFPMLAE FCGMDYVTLV RSILRNALHR NGLPFQI
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