| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1634 |
|---|
| Symbol | |
|---|
| ID | 5744455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 2013974 |
|---|
| End bp | 2014867 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 641292734 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001558745 |
|---|
| Protein GI | 160879777 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00180587 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA TTGAAGTTGA CCATATCACG AAGGATTATG GTAACCAGAA AGGGGTATTT
GACGTATCAT TTTTTGTTGA GAAAGGAGAA GTTGTTGGCT TTCTTGGACC AAATGGTGCA
GGAAAAACAA CGACGATACG CCAGTTAATG GGATTTTTGC ATCCGGATCA AGGAAAAGTA
TCCATCCTTG GAATGGATTG TTTCGAGCAA GCAAGTATTA TTCAGAATAG TTTAGGATAT
CTACCTGGTG AAATTACCTT TATGGATGAC ATGACAGGAT TAGAGTTTCT GCACTTTATT
GCTAAGATGA AGAAAATGAA AGATTTTTCT TATGCAGAGA ATCTTATGAA TTATTTCGAA
CTTGATCCAA AAGGAAAAAT TAAAAAGATG TCAAAGGGAA TGAAGCAAAA GATAGGTATT
GTTTGTGCTT TTATGAATCA GCCGGACATT CTAATTCTTG ACGAACCAAC AAGTGGCCTA
GATCCTTTAA TGCAAAGCAA ATTTGTTGAT TTAATTTTAG AGGAGAAGAA ACGTGGAGCC
ACTATTTTTA TGTCCTCTCA TATATTTGAA GAGGTTGAAA AAACCTGTGA CAGAGCAGTT
ATTATAAAAG AAGGAAAGAT AATAGAGGAT GCACAGATTG AAAAATTAAA ACATAGTAGA
AAGAAGGTTT ATGAGATAAC CTTCGCTAAG AAAGAGATGG CAACAATGTT TCTTGAACAT
ACAACTTATA AAGAATTGGA AGTTTCGGAT AATGTGATAA CCATTCGTAT TAGTGGCTCT
ACGGATCAAT TAATAAAATC TCTTGCTACA TTTGAGATTT TGGACTTAAA TGTAAAGACC
CAGTCGCTGG AAGATCTGTT TATGACTTTT TATGGAGGGA AAAACAATGA TTAG
|
|---|
| Protein sequence | MKVIEVDHIT KDYGNQKGVF DVSFFVEKGE VVGFLGPNGA GKTTTIRQLM GFLHPDQGKV
SILGMDCFEQ ASIIQNSLGY LPGEITFMDD MTGLEFLHFI AKMKKMKDFS YAENLMNYFE
LDPKGKIKKM SKGMKQKIGI VCAFMNQPDI LILDEPTSGL DPLMQSKFVD LILEEKKRGA
TIFMSSHIFE EVEKTCDRAV IIKEGKIIED AQIEKLKHSR KKVYEITFAK KEMATMFLEH
TTYKELEVSD NVITIRISGS TDQLIKSLAT FEILDLNVKT QSLEDLFMTF YGGKNND
|
|---|
| |