| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1471 |
|---|
| Symbol | |
|---|
| ID | 5742421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1813126 |
|---|
| End bp | 1814313 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641292573 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001558584 |
|---|
| Protein GI | 160879616 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4705] Uncharacterized membrane-anchored protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000124905 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA CGAAGTATGA GGTAATGCTA AATAAGGTGC CGGAAGTCAC CATTTTCTTT
TGGATCATCA AGGTCTTGTG TACCACGGTT GGCGAGACCG TATCGGATTT TTTAAACGTA
ACATTAGGGC TCGGCTTAAA TGTAACCTCG GTTGTCATGG GTGTACTACT GGCGGTTGCT
CTTGTTTTTC AGTTTCGGGC GAAAAAATAT ATGCCCGGAT TGTATTGGAT GAACGTTGCA
TTACTTAGTG TATTTGGAAC GCTTGTGACA GACACGCTGA CAGATGCACT CGGATTGCCG
CTTGAAATCA GCACGGTAGG GTTCTCCATT TGTCTGCTAC TTACGTTTTT AGTCTGGCAT
CATTATGAAA AAACATTGTC CATTCACTTG ATATATACAG TGCGCAGAGA AGCATTTTAC
TGGCTGGCCA TTCTTTTCAC TTTTGCACTC GGAACCGCCT CCGGTGATTT GATGGCTGAA
GGGTTGGGTC TTGGCTATTT ACCTACCGGT ATCATCGTCT GCGCGGTTAT TATCTGTGTT
GGAATTGGAT ACAAATTGGG ACTTGATTCG GTTTTGTCCT TCTGGATTGC GTACATTATG
ACCCGGCCTT TGGGCGCATC ATTGGGCGAC TTTCTTTCCC AACCAAAATC GAATGGAGGA
CTTGGACTTG GAACGACTTC AACAAGTGTT ATCTTCCTTG CTGCAATTCT CGCAACAGTG
GTGTTCCTTA TCGTAACCAA AAAAGATATT CGGGAGTTGA GTACTTCGGA TCAAATGCCG
ACCGGCGAAA CATCAAGCAA GAGTAATCGT CGCGTGTTGA TACAGACAAT AGCAGTCATT
TGCATATTAG CGTTGCTCAG TGGAAGTGGA TATGTCATCC GACAGGCAAG TCTTGCAAAC
AATACAAACA GCTCGGTATC CTGGTCGGAT ATGTCGCAGT TTGTAACTAT AGAGGAGGAT
GTGCTTGTGC TTGTGAATAA TGGTGACTTT TCAGCGGCGA AAACTCGTGT CAAAGATTTG
GAGACCACTT GGGATCAATC CGCTGCTGTG CTGAAGGCTG CAGACAAAGA GAGATGGAAA
CAGGCAGACT CCGGAATTGA TGCGGTTTTG CATGAGATTC GGGCAGGCAA ACCGGATATG
GACTCAAGCA AAATAGCATT GGAAAACTCA ATGAATATGT TTAAATAG
|
|---|
| Protein sequence | MQKTKYEVML NKVPEVTIFF WIIKVLCTTV GETVSDFLNV TLGLGLNVTS VVMGVLLAVA
LVFQFRAKKY MPGLYWMNVA LLSVFGTLVT DTLTDALGLP LEISTVGFSI CLLLTFLVWH
HYEKTLSIHL IYTVRREAFY WLAILFTFAL GTASGDLMAE GLGLGYLPTG IIVCAVIICV
GIGYKLGLDS VLSFWIAYIM TRPLGASLGD FLSQPKSNGG LGLGTTSTSV IFLAAILATV
VFLIVTKKDI RELSTSDQMP TGETSSKSNR RVLIQTIAVI CILALLSGSG YVIRQASLAN
NTNSSVSWSD MSQFVTIEED VLVLVNNGDF SAAKTRVKDL ETTWDQSAAV LKAADKERWK
QADSGIDAVL HEIRAGKPDM DSSKIALENS MNMFK
|
|---|
| |