| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1409 |
|---|
| Symbol | |
|---|
| ID | 5742359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1749318 |
|---|
| End bp | 1750049 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641292512 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001558523 |
|---|
| Protein GI | 160879555 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4976] Predicted methyltransferase (contains TPR repeat) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA ATAAATATGA TGACAAAATA TTTTTTGATA AATATAGTAA TATGGAACGT
TCCAAAAAAG GACTTGCTGG TGCCGGTGAG TGGAAGACCC TTGAATCTAT GTTACCTGAT
TTTAAGGATA AACGAGTTTT GGATCTAGGA TGTGGATTTG GATGGCATTG TCAGTATGCT
GTAGAGCATG GTGCTAAAGC TGTCACAGGG ATTGATATAT CTGAAAAAAT GTTAGCTGTA
GCAAAAGAAA AAACAGATAA TAATATATGC TATATCAAAA TGCCTATCGA AGGTATTTCA
TTTAGTGAAA ACTCATTTGA TACAGTAATT AGTTCGCTTG CTTTTCACTA TATAGAATCC
TTTGAGTCGA TTGTTGAGAA AGTATCTGAT TGTTTAGTAC ACGGCGGGGA TTTTGTTTTC
TCCGTAGAAC ATCCGATCTT TACCGCTTAT GGCAATCAAG ACTGGTATTA CGACGAAAAT
GGGAATATTC TTCATTTTCC TGTAGATAAT TACTTTTTTG AAGGACTGAG AACCTCTAAC
TTTCTTGGAG AAAATGTAAT CAAATATCAC AAGACACTTA CAACATACCT GAATGGTTTA
ATACAGGGCG GCTTTGAATT AACCGGTGTT GTAGAGCCTC AACCATCAGT GCATTTACTT
GAAATTGTTA AGGGAATGGC AGATGAGCTA CGCAGACCAA TGATGCTGAT TATCTCAGCG
AAGAAAAAAT AA
|
|---|
| Protein sequence | MKQNKYDDKI FFDKYSNMER SKKGLAGAGE WKTLESMLPD FKDKRVLDLG CGFGWHCQYA
VEHGAKAVTG IDISEKMLAV AKEKTDNNIC YIKMPIEGIS FSENSFDTVI SSLAFHYIES
FESIVEKVSD CLVHGGDFVF SVEHPIFTAY GNQDWYYDEN GNILHFPVDN YFFEGLRTSN
FLGENVIKYH KTLTTYLNGL IQGGFELTGV VEPQPSVHLL EIVKGMADEL RRPMMLIISA
KKK
|
|---|
| |