Gene Cphy_1405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1405 
Symbol 
ID5742355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp1747233 
End bp1747550 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content35% 
IMG OID641292508 
ProductHxlR family transcriptional regulator 
Protein accessionYP_001558519 
Protein GI160879551 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAAG AAGAAGTCTA TTCCAAGCCA TTTGAATATA CATTGTCTTT GGTGGGTGGA 
AAATGGAAGA AGCATATTCT TTTTTGGTTA TGGCACCGTA AAGTGATGCG TTATAGTGAA
ATAAAAAGAG TTCTTAAAAA TATTACACAT AAAATGCTCA GCAACCAATT AAAAGAACTT
GAAGCTGATG GGTTAATCAT TCGAAAAGAA TATCCACAGG TACCACCAAA AGTAGAATAT
CGACTTACAG ATAAAGGAGT TTCTCTAATG CCAGTTCTAG ATGCTATGTG TAAGTGGGGG
CACCAGTTTG TAGAATAA
 
Protein sequence
MEQEEVYSKP FEYTLSLVGG KWKKHILFWL WHRKVMRYSE IKRVLKNITH KMLSNQLKEL 
EADGLIIRKE YPQVPPKVEY RLTDKGVSLM PVLDAMCKWG HQFVE