Gene Cphy_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_1374 
Symbol 
ID5742324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp1714606 
End bp1715763 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content39% 
IMG OID641292477 
Productcobalamin biosynthesis protein CbiD 
Protein accessionYP_001558488 
Protein GI160879520 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1903] Cobalamin biosynthesis protein CbiD 
TIGRFAM ID[TIGR00312] cobalamin biosynthesis protein CbiD 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATATA AGAACGGACT GGAAGATTTG TATATATTAA AGGATAACAA GAAATTAAGA 
TATGGATATA CTACCGGATC GTGTGCGGCT GCAGCGGCTA AGGCAGCAAC CTTAATGCTG 
CTTTGTAAAA CAGAAGTACA TTATGTGGAT CTGATGACTC CGAAGGGGAT CCGATTAAAT 
CTCAAAATTT TAGATATTAT CATGGAAGAG GATTCTGTTA CTTGCGCTGT GCAAAAGGAT 
AGTGGAGATG ATCCGGATGT AACCAATGGT ATTATGGTAT ATGCAAAGGT TTCTAAGAAT 
GAGGAAGGAA CTGTTTGTAT TGATGGTGGT ATTGGTGTTG GAAGGGTAAC AAAAGCAGGA 
TTGGAGCAGC CCAAAGGTAA TGCGGCAATC AATAGAGTTC CAAGACAAAT GATTACAGAT 
GCTGTAATGG AAGTATGCGA TGAAAATGAT TATGCCAGCG GAATCAATGT AGAGATCATC 
ATTCCTCAGG GAGTTGAAAT AGCAAAACGA ACCTTTAATC CCAATTTAGG GATTGTGGGT 
GGTATTTCTG TGCTTGGAAC CAGTGGTATC GTAGAGCCGA TGAGTGAAGC TGCACTCATT 
GAAAGTATTC GTGTCGAAAT GAAAATGGCT GTGGCAAACG GAGCAGAATA TCTACTACTT 
TCACCAGGTA ATTATGGTGC GGACTTTACA AAGGAAAACC TGTCCATTCC CAACGTGCAA 
TCCATTAAGT TTAGTAATTA TGTGGGAGAA GCGATTGATA TCGCAAATGA GTTAGGTGTA 
AAAGGGATAT TATTTATCAG CCATATTGGA AAGTTCATAA AAGTGGCGGG TGGTATCATG 
AATACCCATT CCAAATACGC AGATGCAAGA ATGGAGATTC TTGCGGCAAA TGCTGTTTTA 
GCAGGAGCCT CTATCCATAC TTTAGAAGAA ATATTAAAAT GTGTAACCAC CGATGAGGCA 
CTTGCCATAT TAGAATTATC TGGAATAACG GAAAAAACAA TGGAGCATGT AGTGGAAAAG 
ATAAAACATT ACCTGAATCG CAGAGCGTAT GAATCCATGG AAATAGGTGC CATTATCTTT 
TCTAACGAGT ATGGAATATT AGGACAAACA GAAAATGCAA AGGAGTTACT TCGATGTTTG 
GAAAATTGTA CGGAGTAG
 
Protein sequence
MEYKNGLEDL YILKDNKKLR YGYTTGSCAA AAAKAATLML LCKTEVHYVD LMTPKGIRLN 
LKILDIIMEE DSVTCAVQKD SGDDPDVTNG IMVYAKVSKN EEGTVCIDGG IGVGRVTKAG 
LEQPKGNAAI NRVPRQMITD AVMEVCDEND YASGINVEII IPQGVEIAKR TFNPNLGIVG 
GISVLGTSGI VEPMSEAALI ESIRVEMKMA VANGAEYLLL SPGNYGADFT KENLSIPNVQ 
SIKFSNYVGE AIDIANELGV KGILFISHIG KFIKVAGGIM NTHSKYADAR MEILAANAVL 
AGASIHTLEE ILKCVTTDEA LAILELSGIT EKTMEHVVEK IKHYLNRRAY ESMEIGAIIF 
SNEYGILGQT ENAKELLRCL ENCTE