| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1370 |
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| Symbol | hemC |
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| ID | 5742320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1709741 |
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| End bp | 1710628 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641292473 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001558484 |
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| Protein GI | 160879516 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAATAA TTCGTATCGG AAGCAGAGAA AGTGAACTGG CAGTTAGACA GTCGAGAATA
CTGATTGATT CTATAAAACA ATATCATAAT GAAATAGAGA CTGAGCTTAT TACCATGAAG
ACGACAGGAG ATATCATACT GGATAAAAGC CTAGACAAAA TTGGAGGAAA AGGTCTCTTT
GTAAAGGAGC TAGATTTAGC GCTTATCGAA GGGAGAAGTG ACCTGTCGGT ACATAGCTTA
AAGGATATGC CAATGGAAAC GCCGGAGGAA TTACCTATTT TAGCATTTTC AAAAAGGGAG
GATCCAAGAG ATGCGCTGGT TTTACCATTA GGATGTACAG AAATTGACCC TGTTTTACCA
ATTGGATGTT CCAGCCAGAG ACGAATGCTT CAACTAAAAA AGATTTATCC AGGTGCCAAT
TATAAAGGAA TCAGAGGAAA TGTACTTACT AGGCTTGAGA AACTTGATAG AGGAGAATAT
GGTGCTCTTG TCTTAGCTGC GGCAGGGTTA AAGAGATTGG GATTAGAAAG CCGTATCAGC
CGAATCTTTA CGACGGAGGA AATTATTCCA GCTGCCGGAC AGGGGATACT GGCTGTTCAG
GGAAGAGCGG GTGAAAGTTA TGAATTCTTA AAACAATTTC ATAATGAAGA GGCAACCTTT
CAAGCAGTAT GTGAGAGAGC ATTTGTAAAG ACATTGAATG GAGGATGCAG TTCCCCGGTA
GCAGCATATG CAAAGGTTGA AGATGAAATG ATTACAGTAA CAGGCTTATA TTTCGATGAA
ATAACCGGTG ATTATATCAC TGGAAATCTT ACCGGAAAGA AGGAAGATGC AGAGCAACTG
GGGGAGATGT TAGCGAATAA GCTTAGAACG GAATGGTGCA TGCGATGA
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| Protein sequence | MRIIRIGSRE SELAVRQSRI LIDSIKQYHN EIETELITMK TTGDIILDKS LDKIGGKGLF
VKELDLALIE GRSDLSVHSL KDMPMETPEE LPILAFSKRE DPRDALVLPL GCTEIDPVLP
IGCSSQRRML QLKKIYPGAN YKGIRGNVLT RLEKLDRGEY GALVLAAAGL KRLGLESRIS
RIFTTEEIIP AAGQGILAVQ GRAGESYEFL KQFHNEEATF QAVCERAFVK TLNGGCSSPV
AAYAKVEDEM ITVTGLYFDE ITGDYITGNL TGKKEDAEQL GEMLANKLRT EWCMR
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