| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1238 |
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| Symbol | |
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| ID | 5744844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1562954 |
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| End bp | 1564849 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641292344 |
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| Product | ABC transporter related |
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| Protein accession | YP_001558355 |
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| Protein GI | 160879387 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATA AGCCAGTAAT CAAGCGAAAA GGTGTACTAA AGCGCCTGAT AAAAACATTA
TTTGAATTTT ATCCAGTTAT GTTACCGATT GTAGTAGTTT GTATCGTCTT TAATGCAGTG
ATATCCTCCA TCCCTTCTAT CTTTATGCAG AATATCATAT CATCGGTGGA AAGTACTTGG
CAGACTGGAG ATTGGAAATC TGTATCCGGA CATATTGCCG GGCTGGTAGG ATTGTTAGCA
ACCTGCTACG TTCTATCCTT AGCAGCCTCT TTCGCATTTA ACCGAATGAT GGCTATTATA
ACACAAGGTT CTTTAAAGAA ATTGCGTGTA AAAATGTTTC ATGGTATGCA GAATCTTCCG
ATTCAATATT TTGATACACA TAATCATGGA GATATCATGA GTTACTATAC AAATGATATT
GATACTTTAC GTCAGATGGT TTCTCAAAGT ATACCTCAGT TAATGACTTC AGGTATCATT
GCAATTACCG TATTTTGTAT TATGCTATAT TTTAGCGTTT GGATGACCCT TGTGGTTTTA
GTTGGTGTAT TCTTCATGTA TAAAATCACT AAAAAAGTTG GTGGCGGGTC TGCTAAGTAT
TTTATTCGTC AACAGGCGGC TCTTGGTAAA GTGGAAGGTT ATGTCGAAGA GACGATGAAC
GGACAGAAAG TTGTAAAAGT CTTCTGTCAT GAGGAAGAAT GTAAAGCTGG TTTTGATGAG
ATCAACGACG CATTATTCGC AGATGCCGAA AGAGCAAATA AATATGCTAA TACACTAGGA
CCAATCTTAA ATAATATTGG AAATATCCTT TATGTAATTG TTGCATTATT TGGTGGATTT
TTATTACTTA CCGATGCACC AAACGTAAGT ATATCAGGAT TTGCTATCAG TATAAGTATT
GTAGTACCAT TTTTAAATAT GACGAAGCAG TTTTCTGGAA ATATCAATCA AGTATCGCAC
CAGATTAATG CAGTTGTTAT GGGACTTGCA GGAGCTTCTC GAATCTTTGA ACTTATCGAT
GAGTTGCCAG AAGAGGATGA AGGTAATGTA ACGTTAGTGA ATGCCAGAGA AGAAAATGGA
GCAATAGTAG AATGTAAGGA ACGTACCGGA ATTTGGGCTT GGAAATATCC ACATGACGAT
GGAACAGTAT CTTATACAAA ACTAACCGGT GATGTTAGGA TGTTTGATGT AGATTTTGGA
TATGTAGAAA ATAAGACCAT ATTGCATAAC ATAACCCTGT ATGCAGAGCC AGGACAGAAA
ATAGCTTTTG TTGGTGCGAC TGGTGCTGGT AAGACAACAA TCACAAACCT TATCAATCGT
TTTTATGATA TCGCAGATGG TAAGATTCGA TATGATGGTA TCAATATAAA TAAAATCAAA
AAGTCAGACC TTCGTCGTTC CCTTGGTGTG GTTTTACAAG ATACCAATCT TTTTACCGGA
ACAGTTATGG ACAATATTCG TTATGGTAAG CTAGATGCTA CGGATGGGGA ATGTATTGAG
GCTGCAAAAT TAGCAGGTGC TCATGATTTT ATTACGCGTT TGCCGGATGG TTATCAGACA
CCACTTACTA GCAACGGATC TAATTTATCT CAAGGACAGA GACAGCTATT AGCTATTGCA
CGAGCAGCAG TTGCTGATCC TCCGGTAATG ATTCTAGATG AGGCTACTTC CTCCATTGAT
ACCCGTACCG AAGCAATTGT ACAGCGAGGC ATGGATGCAT TAATGAAGGG CCGTACGGTA
TTTGTAATAG CTCATCGACT TTCTACTGTT AAGAATTCCG ATGTGATTAT GGTTTTAGAA
CAGGGCCATA TCGTAGAACG TGGTAATCAT GATCAGCTAA TTGCTGAAAA GGGAAAATAT
TATCAGTTGT ATACCGGTGC TTTTGAATTA GAATAG
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| Protein sequence | MQNKPVIKRK GVLKRLIKTL FEFYPVMLPI VVVCIVFNAV ISSIPSIFMQ NIISSVESTW
QTGDWKSVSG HIAGLVGLLA TCYVLSLAAS FAFNRMMAII TQGSLKKLRV KMFHGMQNLP
IQYFDTHNHG DIMSYYTNDI DTLRQMVSQS IPQLMTSGII AITVFCIMLY FSVWMTLVVL
VGVFFMYKIT KKVGGGSAKY FIRQQAALGK VEGYVEETMN GQKVVKVFCH EEECKAGFDE
INDALFADAE RANKYANTLG PILNNIGNIL YVIVALFGGF LLLTDAPNVS ISGFAISISI
VVPFLNMTKQ FSGNINQVSH QINAVVMGLA GASRIFELID ELPEEDEGNV TLVNAREENG
AIVECKERTG IWAWKYPHDD GTVSYTKLTG DVRMFDVDFG YVENKTILHN ITLYAEPGQK
IAFVGATGAG KTTITNLINR FYDIADGKIR YDGININKIK KSDLRRSLGV VLQDTNLFTG
TVMDNIRYGK LDATDGECIE AAKLAGAHDF ITRLPDGYQT PLTSNGSNLS QGQRQLLAIA
RAAVADPPVM ILDEATSSID TRTEAIVQRG MDALMKGRTV FVIAHRLSTV KNSDVIMVLE
QGHIVERGNH DQLIAEKGKY YQLYTGAFEL E
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