| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_1227 |
|---|
| Symbol | |
|---|
| ID | 5744832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | + |
|---|
| Start bp | 1549735 |
|---|
| End bp | 1550889 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641292332 |
|---|
| Product | cystathionine gamma-synthase |
|---|
| Protein accession | YP_001558344 |
|---|
| Protein GI | 160879376 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAT TTAATAAGAT TTCAACAACA TTAATTCATG GAGGTATTGA CGGAGATGAG
AGAACTGGAG CAGTGAATGT TCCAATCTAT CAGACGTCAA CTTATAAACA GGAAGGGTTA
GGAAAGCATA AGGGATATGA ATATTCGAGA ACCGGAAATC CCACTAGAGA AGCCCTTGAG
AAACTTATTG CTGATTTAGA GGAAGGCTTA TATGGGTTGG CATTTGCCTC AGGTATGGCA
GCCACGACAG CTGTTTTAAC CTTATTTGAA ACGGGTGACA AGATATTAAT ATCAAAAAAT
GTGTATGGTG GAACCTTCCG AGTGCTAGAT AAAATTTTTA GTCAGTTTGG TATCCATTAT
GAGATCGTAG ATACGAATGA TTTAGAACTT CTTGAAAATT CTTTGTCTGA AGAAGTTAAG
GCTGTATTTA TTGAAAGCCC TGCAAATCCT TTAATGACAG TAACGGATAT TAAAGCCGTA
TCGGAAGTTA CTAAAAAGCA GGGGAAATTA TTAATCGTTG ATAACACATT TATGACTCCG
TATTTACAAC GCCCTCTGAC ACTTGGAGCT GACATTGTAG TCCATAGTGC AACAAAGTAC
TTAGGTGGGC ATAGTGATCT TATTGCAGGG CTAGCTGTTG TAAATGATGA TGCTCTGGCA
AAAAAATTAT ACTTTATACA GAATGCAACA GGGGGAATTC TTCAACCGTT TGATGCCTTT
TTGTTAATAC GTGGAATGAA AACTCTAGGG GTTAGGCTAG ACCGCCATCA GGAGAATGCA
AAGGCTGTAG CGGAGTGGCT TTTAGATCAA GATGCAGTAA AAAATGTATA TTATCCGGGG
CTGACAACAT TTGAAGGCTA TGAAATCCAG AGGAAGCAAG CAGACGGACC GGGTGCTATG
ATATCCTTTG AATTGAACGA GGGGTATCAT ATCGAAAAGT TTTTTGGTGA ATTAAAGCTG
ATAACACTAG CAGAAAGCCT TGGCGGTGTA GAATCACTAG TATGCCATCC AGCCAGCATG
ACACATGCGT CGATACCGGA GGAAATAAGA AAGCAAGTTG GAATATCAAA TCAATTAATC
CGCCTCTCGG TTGGAATTGA AAACAAAGAA GATATTATTG CAGACCTTAA GAATGCAATA
CTTTTAGCTA AATAA
|
|---|
| Protein sequence | MDKFNKISTT LIHGGIDGDE RTGAVNVPIY QTSTYKQEGL GKHKGYEYSR TGNPTREALE
KLIADLEEGL YGLAFASGMA ATTAVLTLFE TGDKILISKN VYGGTFRVLD KIFSQFGIHY
EIVDTNDLEL LENSLSEEVK AVFIESPANP LMTVTDIKAV SEVTKKQGKL LIVDNTFMTP
YLQRPLTLGA DIVVHSATKY LGGHSDLIAG LAVVNDDALA KKLYFIQNAT GGILQPFDAF
LLIRGMKTLG VRLDRHQENA KAVAEWLLDQ DAVKNVYYPG LTTFEGYEIQ RKQADGPGAM
ISFELNEGYH IEKFFGELKL ITLAESLGGV ESLVCHPASM THASIPEEIR KQVGISNQLI
RLSVGIENKE DIIADLKNAI LLAK
|
|---|
| |