Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0884 |
Symbol | |
ID | 5741756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 1135340 |
End bp | 1135951 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641291997 |
Product | SNARE associated Golgi protein |
Protein accession | YP_001558009 |
Protein GI | 160879041 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.141066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCTG TTGTCCGTTT TATCTATGAA AATGGACTTT TTGCCATGTT TCTTATTATT CTACTTGAAT ACGGTTGCTT TCCAATCTCT AGCGAGATTG TCTTACCTTT TTCTGGTGCT GTTGCATCTC TTCAAAATAT ACCATTCTTT CTTATGCTTC CAGTTAGCGT ATGTGCTGGA ATTATTGGAA CAAGTTTCTG TTACTTCGTT GGTAGAATCG GTGGACATTG TATCTTAGAA AAACTTACGA CGAAGTTTCC AAAAACGAAG AAAAGCATCG ATGCCTCCTA CCAGCGTTTT GATCGCTATG GTCCCTATGT CGTTTGCTTT GGACGAATGG TTCCAATTAT CCGTACTTAC ATAGCGTTTG TAGCAGGAGC AGTGAAACAG CCCTATCCCG TATTCGCCTT ATTCTCTATC ATAGGTATTA CTTTATGGAA TTCCTTGTTA ATCGGTATTG GATATGTCCT TCGCAGTAAT TGGTCCAATA CTGTTACATA TTATGCAAAA TACAAAGATA TTCTGATTCC GGTACTTCTG TTAGTAATTT TATTTTTGAT AGCCCGAAAG ATTCGTAAGA AAAAACGTAT GCAAGAAATT AAAGAAAAGT AA
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Protein sequence | MDSVVRFIYE NGLFAMFLII LLEYGCFPIS SEIVLPFSGA VASLQNIPFF LMLPVSVCAG IIGTSFCYFV GRIGGHCILE KLTTKFPKTK KSIDASYQRF DRYGPYVVCF GRMVPIIRTY IAFVAGAVKQ PYPVFALFSI IGITLWNSLL IGIGYVLRSN WSNTVTYYAK YKDILIPVLL LVILFLIARK IRKKKRMQEI KEK
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