| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0862 |
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| Symbol | |
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| ID | 5741734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 1101768 |
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| End bp | 1103474 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291975 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001557987 |
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| Protein GI | 160879019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGG GTAGCAAAAA ATGTATTGCG CTTCTACTTT GTTTCATCAT GCTGTTTTCT
CTCGCTGCTT GCGGTAAAGG GAAAACAACC GATACAACAG TAGGGGCTAC AACGGGACCA
ACAAAAGCAG TAGTACCTAC AGATGGAACG AAAGAAGGAA CGAAAGAAGG AACAAAGGAT
AATAACAATC AGGGAGAAGT AGTTCCTGGT TGGCAGACAA ACGCATCCGA TAAGGTTGAT
TTAACATGGT ACATAAACTT TTCTTGGTTT ACTACTCCTT GGGGTGAGAA CTTAATATCC
AAGACGATTA CAGAAGAAAC TGGCTGTAAC ATTAATTTTG TCGTTCCAGC AGGTAACGAA
GCTGAGAAAC TAAATTCTTT GATTGCATCA GATTCTTTAC CAGATTTATT AACGATTGGT
TGGTGGGAAG GCCAAGTAAA TCAGATGATC GAAGATGGAA TGGTTTATGC TTTAGACGAA
CTAGCAACGA AGTATGACCC ATACTGGTTT GAAGTAGCAG ATAAAGGTCG TGTTGGCTGG
TTTACAAAAG AAGATGGACA CGTTTACGGA TATCCAAACT CTTCTTTCTC TCCACAAGAT
TATGAAAAAT ATGATAACAT CTCTTCCAAT CAGACCTTCC TTGTAAGAAA GGATATGTAT
GAAGCAATTG GAAGTCCAGA TATGACAACA CCGGAAGGTT TTATTGCAGC AGTAAAAGCA
GCAGCGGCTA AGTACCCAGA AGTGAATGGA CAGCCAATCA TTCCAGTAGG TGCACATGAA
TTTATTTCAA CTGGTAATAA TTCTTTTGAC CTGTATTTAT CTAACTTCTT GGCAACCCCT
TATGAAAAAG ATGGTAAGTA CTACGATAGA TATAGCGATC CTGAATTAGT TCGTTGGTTA
AAAGCTTTTC GCGAATTAGG TGCAGAAGGA TATCTAAAAG AAGATATCTT CGTTGACAAG
AGAGCTCAAA TGGAAGAAAA GATTGCTCAG GGACGTTACT TCTGTATGTT ATATCAGAGA
ACTGATTTAG CAGATCAAGA GAAGGTATTA TACAAGAATG ATCCAAACAG TATTTATATC
GCAATCGATG GACCAAAGAA TTCCAAAGGA GATGCTTACA CCTTACCAGG AACCGGTATC
AATGGTTGGT GTGTAACTAT GATATCTAAG AAGTGTCAGC GTCCAGATCG TGCGATCCAA
TTATGCTCTT ACTTAATGAG TGAGCATGGG CAGCATATGA CTTGGTTAGG TGTAGAAGGT
GTTACTTGGG ATTATGTAAA TGGTAAAGAA ACAATGAAAC CAGAAGTGAA AGAAATTTTA
ACAACTGATC GTAGTGCTTA CGATAAACAG TATGGTGCAG ATTCCTGTTA CTGGATGTTC
CAAGACAATG CAATGTCATT AAAATGGGCG GTGGAAACAC CAGAACCTCT AGGACAGATG
GAACGCTGGA CCTTCCCATA TGTTATATCA GTATCCCAGT ATGATGTTAG CTTAGCAGCA
GATTCTGATG AATTCGATAT TCAGAGTAAT GTAGATAATG AATGGGGTGT TGTATTACCT
CGACTATTAT TAGCGAAGAC AGAAGCAGAC TTTGATACTA TCTGGAATGC ATTTATTCAG
AAGAAAAAAG ATTTCGGTTT TGATAAAGTT CTAGCAACGA AGACTGAGAT GATGAAGGAA
GCAAAAGTGA AATTAGGAGT TAACTAA
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| Protein sequence | MKMGSKKCIA LLLCFIMLFS LAACGKGKTT DTTVGATTGP TKAVVPTDGT KEGTKEGTKD
NNNQGEVVPG WQTNASDKVD LTWYINFSWF TTPWGENLIS KTITEETGCN INFVVPAGNE
AEKLNSLIAS DSLPDLLTIG WWEGQVNQMI EDGMVYALDE LATKYDPYWF EVADKGRVGW
FTKEDGHVYG YPNSSFSPQD YEKYDNISSN QTFLVRKDMY EAIGSPDMTT PEGFIAAVKA
AAAKYPEVNG QPIIPVGAHE FISTGNNSFD LYLSNFLATP YEKDGKYYDR YSDPELVRWL
KAFRELGAEG YLKEDIFVDK RAQMEEKIAQ GRYFCMLYQR TDLADQEKVL YKNDPNSIYI
AIDGPKNSKG DAYTLPGTGI NGWCVTMISK KCQRPDRAIQ LCSYLMSEHG QHMTWLGVEG
VTWDYVNGKE TMKPEVKEIL TTDRSAYDKQ YGADSCYWMF QDNAMSLKWA VETPEPLGQM
ERWTFPYVIS VSQYDVSLAA DSDEFDIQSN VDNEWGVVLP RLLLAKTEAD FDTIWNAFIQ
KKKDFGFDKV LATKTEMMKE AKVKLGVN
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