20 homologs were found in PanDaTox collection
for query gene Cphy_0862 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010001  Cphy_0862  extracellular solute-binding protein  100 
 
 
568 aa  1181    Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0087  extracellular solute-binding protein  61.07 
 
 
175 aa  180  5.999999999999999e-44  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.000254979  n/a   
 
 
-
 
NC_012034  Athe_0847  extracellular solute-binding protein family 1  23.12 
 
 
556 aa  94.7  4e-18  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0310  extracellular solute-binding protein family 1  25.8 
 
 
566 aa  93.2  1e-17  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2052  extracellular solute-binding protein family 1  23.09 
 
 
565 aa  84.7  0.000000000000004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0849  extracellular solute-binding protein family 1  25.86 
 
 
558 aa  84  0.000000000000008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.206456  n/a   
 
 
-
 
NC_012034  Athe_2554  extracellular solute-binding protein family 1  22.57 
 
 
548 aa  79.7  0.0000000000001  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00103966  n/a   
 
 
-
 
NC_011898  Ccel_0150  extracellular solute-binding protein family 1  22.95 
 
 
567 aa  79  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013515  Smon_0123  extracellular solute-binding protein family 1  24.29 
 
 
505 aa  59.3  0.0000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1118  extracellular solute-binding protein  24.83 
 
 
541 aa  56.6  0.000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000575789  n/a   
 
 
-
 
NC_013946  Mrub_0279  extracellular solute-binding protein family 1  20.06 
 
 
510 aa  55.5  0.000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.795384  normal 
 
 
-
 
NC_013172  Bfae_12990  ABC-type sugar transport system, periplasmic component  27.53 
 
 
511 aa  55.5  0.000003  Brachybacterium faecium DSM 4810  Bacteria  normal  0.232436  n/a   
 
 
-
 
NC_010001  Cphy_1549  hypothetical protein  22.8 
 
 
595 aa  51.2  0.00005  Clostridium phytofermentans ISDg  Bacteria  normal  0.0768704  n/a   
 
 
-
 
NC_012669  Bcav_4040  hypothetical protein  30.99 
 
 
567 aa  48.9  0.0002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1101  extracellular solute-binding protein family 1  22.26 
 
 
567 aa  47.4  0.0008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013530  Xcel_2784  extracellular solute-binding protein family 1  21.51 
 
 
573 aa  47.4  0.0008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2458  extracellular solute-binding protein family 1  22.89 
 
 
588 aa  46.6  0.001  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0482  extracellular solute-binding protein  25.53 
 
 
443 aa  46.2  0.002  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00268905  n/a   
 
 
-
 
NC_008527  LACR_1580  ABC-type sugar transport system, periplasmic component  21.81 
 
 
544 aa  45.1  0.004  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0663  ABC-type sugar transport system periplasmic component-like protein  20.54 
 
 
556 aa  44.3  0.007  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00000120034  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>