| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0492 |
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| Symbol | |
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| ID | 5743406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 623046 |
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| End bp | 627716 |
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| Gene Length | 4671 bp |
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| Protein Length | 1556 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291604 |
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| Product | alginate lyase 2 |
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| Protein accession | YP_001557618 |
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| Protein GI | 160878650 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATGTA GACATAGTAA GTTAAGAAGG ATAACAGCAC TAATTGTATT GATAGCCATC
GTAATTACTG GTATGCCTAA TACCGTCCAT GCACAAGATA AAACTTATAT AATGTACCAG
ATAAAAGATG GGGATACAAT TAAGAAAATA GCTGATCGAT ACAATACAAG CATTGACAGC
ATTATGAAAT TAAATAATAT AAAAAATTCA AATGTATTTT ATTCCGGAAA AGAAACCAAG
GTACCGATAG CCTCGGTAAC TTATGTGGTA AAAAAAGGAG ATACACTTTC AAAGATAGCG
AGAACTCACG GTACCACAGT TGATACTATT GCGAAATTAA ATGGAATCAA AGATGAAAAT
AAGATACAAA CAGGCCAAAA ACTTATCGTA GTAAAAGAGG AACATGTAGA GAGTACAACT
TCTGTAAACA ATGAGGAAAC CTTAGTAAGA ACACAGAAGG AATTATTAAA TGCCCTTGCA
TCGAAAAGTT CTACGGTGAT TCGAATTGCT ACTGAAAAAA AGATTACTTT TGAAATTCCA
AAAAAGAATT ATAACGCAAA AGTTTTGATT GTAGATGCGA AAAATTCGGA AGTTAAGAAC
GAAGGAACAT TTCATCATAT ATTAATTCAA GCCATTAAGA CATCAACCTT TTATGAATAT
GGCAGTAAGA ATACCATTAT TATAAAAGCT TCTACAGCAC ATTTGGTAAT GGAAAAGACC
GCTGTACCTG GAAAGATTAT TGTGGAAGAT ACGAATAAAG AGCTTACTAT CGATAACTAT
ACGAAGAAGC AGATGACACT TCAGACGTCA GATACAGTAT TAACAGTAAA GGCTGAAAAT
TCGGTGGAAG TGAAACAAGG TATCGTAAAG AAGGAAAGCA AGTTGAATCA AATAAAACCA
ACAGTAGCAC CAACTACGAA GCCGACCGCA GTACCTACTA CGAAACCAAC CGTAGTACCT
ACAATTACTC CAACTGGTAC TCCAAATCCA ACTACTGCTA TGCCAGAACC AACGAGCATA
CCAACGGATA TACCGACACC GGTGCCGACA ACGATACCGC CGACTAATGT ACCAACAATA
AGTCCGACAC CAATACCACA GCTACCTTCT GATATTGTTG ATTTTTCAAC CTGGAAATTA
CAACTTCCGA TAGCAGGAGA ATCTGGTTTA TCAGTAAAAG AAGTAGGCCC TGAGGACTTA
AACAACGGTT TTGTTCATGA TGAATACTTC TATGTTGATA CAGATGGTGG TATTGTGTTC
CACTGCCCTG TGGATGGATT TAAGACAGCA AACACGAATT ATGCGAGAAC CGAGCTTCGA
GAGATTATCG ATGGAAAAAA TCCAGCGGTG AACTGGGGAT TTCAAGGAAC CCATATTTTA
AGGACCAGTG AGAGTGTTGA GAAAGTATCA TCCAATGGAA GGACTGTAGT TTCTCAGATT
CATGGAATCT ATCCAAACGG TGATAATGGA CCGGTGCTAG TTAAGGTACA GTATGAACAT
GATTTAAAAG CGGTTGTTGT TATGTTAAAA ACAGGAACAG CGCCTAATGC TGCAGAGCAA
AGGGGATATT TTTATGGTGT AGAATTAGGC CAGCGCTTTG AAACTGAAAT TAAATGTGTG
GAGGGTGTTT TATATGTAAC CATCCAAAGC GAAGGAAGAA AAGAGACCTA TACCATTAAC
TTCATGGAAA TGGACCCTAC ATGGGGAGGG CAGCTTGGTT ATTTCAAAGT AGGAAACTAC
ATACAGGATA GTGATGTAAA TTATGAAAAC GAGGCTGCTA CTGTTAAGGT TTATTCCATC
GAGACATTTC ATGATGACTC TTATGTGGAG CAGGTTCCAA TTGAAGGACT TGCAATGAAA
CAGACAGAGG TGACCTTAGA TGTTGGTGAA ACCATCGGAT TAGAACCTGT TTTTACACCA
GTGGACACCA CGAATAAGGC AGTAACTTGG AATGTAGTCA GCGGACAGAA TAAGGTAGCG
GTGAACAAGC ATGGAGTTGT TACTGCAATA GCAGAGGGTG AAGCAATTGT TAGAGCAACT
AGCAAAGAGA ATAACAGTGT TTTTGCTGAG TGCGTCTTGA CCGTAACATT AGATTCGAAA
CAAGAGGTAA TTGCTCTTTA TGAGCAGGAC TTTGGTAAAG ATATGCCTTA TGATATCGCT
AATGCAAGTG AGTGGCTACT TAGCACGACA GGATATGGTA AGGTGGAAGT AGAACAAGAG
GGAGATAATT TTATATTAAA GCTAACCGAT ACGGATATGG CTGGAACAGC AAAATCCTTG
GTTTATTTTC CAGAGCAATA TGGAACTACT ACGCTTAGCT ATCGGATTCG AGTGGATGAA
ATTTTAGTAA AAGACCCAGA GGGAGCAAAA GCTCAGGCAT CTTATCTCTA CTTACCAGTA
GGAGGCCAGG ATGGTTTCAT GAATGCAGCG GATGAGATGT TCCGTATTAG AAATGGTGCA
ACTTATCAAG GAGGAACACT AATTAATCAT CGTTGGCAGC TATCCCACTC TTATTCGGAT
GCAACAATGA ATTATGCAGC TACCGAGTTT AAGATTGGAG AATGGAAAGA AATCACGGTC
GTTATAACAC CTGATAACGG TACAGCAAAT GCGAATAAAA CTGATGTCTA TGTAGATGGC
TATCGAGTCG CAAGTCAGAT GAACAACAAT AAGATCAATA GCTATATTAA TCAAGCAGAG
TTTTATACTG GTACGAAGGA TCAGGTTAGT TTCAGTATTG ATGATGTGAG AATTTACTCC
GGAGAAAAAG TAAGGGAAGC AGAAGATGCT CTGCCACCAA CGAGCATTAC CCTTGGAACT
GCACCATCTA CGATGGCAAC TGGTGACTCC TTTAAGCTTA CAACATACAT TACACCGGCA
GATGCCAAAG AAGCGGTAAC TTATCTAATT ACAAGTGGAG CAGACCTCGT ATCTGTAAGT
AAGGATGGGT TGGTAACAGC AATCAAGCCA GGAACTGCAA CCGTTCGTGT ACACAGTACC
GGACACGAAG AAATCTTTTC AGAAATTACG CTAACTATCG TGGAGGAGAG CTCTATCGTA
CGTGTAGAGT CCATTGAGCT ACCTGAAAAA ATCATCAATT TAGCAGAAGG AGAAGAGAAA
CAGCTATTTC CAATCCTACT TCCGCTAAAT GCGACGGAGC AAAAGGTAAG CTATGAAGTG
ATTCACGGTT TTGATGTAAT TAGTGTTTCT GCAGAAGGTA TCTTAAGTAC TAAGAATACA
GGTGTCGCTA CTGTGCGTAT TACATGTATG GACAACAGCC GATTGTATGT AGATTGTGAT
ATTTCTGTTA CAAGGAAGAC AAATGAGGGA ACAGTGATAT TTAGAGATAC GTTTGATGAA
ACACTGGACT TAACAAAATG GACACTGGCT ACCTCTAATT TTAACGATAC AATCACGGAA
GTAAAGGACG GATCACTTCA TCTGGTAGAT AACAATACAA GTGGTCAGCC AAGAGCCTAT
GTCTCTTTTG AACCACAGGC CTCAACCTTT AGCATCGAGT TTAAGGTAAA AATGTCTGCT
GATACCATAT ACAACTCGAA CAAAGTATCT GCCCTATGTG TTGCATTTGG TACTGGTACG
ATAACTAGTA CAGCAAGTGA AACATTCCGA TTTAAAACCT CTGCTGATGT GGCAAATGGA
GAAGTTACGA ATCGTAGGTT TGTATATAGC AAGGAAGAAG GCGCTAGCGG ATTTTATGAC
TTGAGTAAGA ACTATGAACT GGAGGAGTGG TATACTGTAA AATTAGTGAC TACACCAAAC
GATGGTTCTA CGAGAGCGAA TACAACAGAT ATCTATATTA ACGATACATT AATGATAGAA
GGTGCCGCGA ATAAAACAAA CGCCGCCATC ATTGATAAAT TAATATTCCA AACAGGAACA
GCCGATTTAA CAGAGTTCTG GATTGATGAT GTTACGATAA CAGCTGGTAA TTCTAGTAGT
GAAACACCTG GTGAAAATCC AGGATACCAA TTAGTATACG AAGAAGATTT TGAAAATGGC
TCTTTACCAG AAGCAAGTTC CACTACAAAC CCTTCCATTC GTCCATCGTG GAAGCTTACG
ACAGGGGAAA GCTCTCTCTC TGAGATAGCT CTTGATACAA TAGACAATTC TGCACTGAAA
TTGTTTGATT CTGATACGAG CAGTCAACCA AAGGCACAAC TTATATTTAA CCCTATCACC
GATAAGGCAA CGATTGAATT TCGCTTAAAA ATGGAAAGTG ATAAAGTTTA TATCGACGGA
ACGAATCAAA AAGCTTCTGC ATTTTGCGTT GTGTTTGGTT CTACTTCGGA TGGAAATATT
GCAACAAAAG CGAATGAAAT GTTCCGATTT AAAACAACCG CAACAGTAGA TACAGCCTCT
GGCTCTGCAA TTTCTTATCG TAAGTATCAA TATGAAAATT CAGATGGAAA ATCCTTTGTA
ACATTGGATG CACCGAGCTA TGAATTGAAT ACTTACTACA CAATAAAATT CGTTATTACG
TTAGGAGATA CTCAAAAGAC AGAGATTTAT ATTGATGGAG TGAAAGTTGC AGAAGGTTAC
CATAAGAAGA ATACGAATAC GGTTGATACG ATATTATTTC AAAGTGGATC AATGGATTTA
ACAAATTATT GGATTGACAA TGTTAAGATT TATCAGGGTC ATAATGTATA A
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| Protein sequence | MGCRHSKLRR ITALIVLIAI VITGMPNTVH AQDKTYIMYQ IKDGDTIKKI ADRYNTSIDS
IMKLNNIKNS NVFYSGKETK VPIASVTYVV KKGDTLSKIA RTHGTTVDTI AKLNGIKDEN
KIQTGQKLIV VKEEHVESTT SVNNEETLVR TQKELLNALA SKSSTVIRIA TEKKITFEIP
KKNYNAKVLI VDAKNSEVKN EGTFHHILIQ AIKTSTFYEY GSKNTIIIKA STAHLVMEKT
AVPGKIIVED TNKELTIDNY TKKQMTLQTS DTVLTVKAEN SVEVKQGIVK KESKLNQIKP
TVAPTTKPTA VPTTKPTVVP TITPTGTPNP TTAMPEPTSI PTDIPTPVPT TIPPTNVPTI
SPTPIPQLPS DIVDFSTWKL QLPIAGESGL SVKEVGPEDL NNGFVHDEYF YVDTDGGIVF
HCPVDGFKTA NTNYARTELR EIIDGKNPAV NWGFQGTHIL RTSESVEKVS SNGRTVVSQI
HGIYPNGDNG PVLVKVQYEH DLKAVVVMLK TGTAPNAAEQ RGYFYGVELG QRFETEIKCV
EGVLYVTIQS EGRKETYTIN FMEMDPTWGG QLGYFKVGNY IQDSDVNYEN EAATVKVYSI
ETFHDDSYVE QVPIEGLAMK QTEVTLDVGE TIGLEPVFTP VDTTNKAVTW NVVSGQNKVA
VNKHGVVTAI AEGEAIVRAT SKENNSVFAE CVLTVTLDSK QEVIALYEQD FGKDMPYDIA
NASEWLLSTT GYGKVEVEQE GDNFILKLTD TDMAGTAKSL VYFPEQYGTT TLSYRIRVDE
ILVKDPEGAK AQASYLYLPV GGQDGFMNAA DEMFRIRNGA TYQGGTLINH RWQLSHSYSD
ATMNYAATEF KIGEWKEITV VITPDNGTAN ANKTDVYVDG YRVASQMNNN KINSYINQAE
FYTGTKDQVS FSIDDVRIYS GEKVREAEDA LPPTSITLGT APSTMATGDS FKLTTYITPA
DAKEAVTYLI TSGADLVSVS KDGLVTAIKP GTATVRVHST GHEEIFSEIT LTIVEESSIV
RVESIELPEK IINLAEGEEK QLFPILLPLN ATEQKVSYEV IHGFDVISVS AEGILSTKNT
GVATVRITCM DNSRLYVDCD ISVTRKTNEG TVIFRDTFDE TLDLTKWTLA TSNFNDTITE
VKDGSLHLVD NNTSGQPRAY VSFEPQASTF SIEFKVKMSA DTIYNSNKVS ALCVAFGTGT
ITSTASETFR FKTSADVANG EVTNRRFVYS KEEGASGFYD LSKNYELEEW YTVKLVTTPN
DGSTRANTTD IYINDTLMIE GAANKTNAAI IDKLIFQTGT ADLTEFWIDD VTITAGNSSS
ETPGENPGYQ LVYEEDFENG SLPEASSTTN PSIRPSWKLT TGESSLSEIA LDTIDNSALK
LFDSDTSSQP KAQLIFNPIT DKATIEFRLK MESDKVYIDG TNQKASAFCV VFGSTSDGNI
ATKANEMFRF KTTATVDTAS GSAISYRKYQ YENSDGKSFV TLDAPSYELN TYYTIKFVIT
LGDTQKTEIY IDGVKVAEGY HKKNTNTVDT ILFQSGSMDL TNYWIDNVKI YQGHNV
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