| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0405 |
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| Symbol | |
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| ID | 5742273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 515791 |
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| End bp | 516495 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641291517 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001557531 |
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| Protein GI | 160878563 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGTCG GGTATTTAAC GATGGATGAT GGACCGTCTG ATATTACACG AGATATTATC
GATTATTTGA CGGGAAGAGG GATAAAACCA GTTTTTTTCT TTACAGGTCA GAATATTGAA
AAAAGGATGG AAGAGGGAGT TTATGCAATA AAAAAAGGAG CTATCATTGG AAATCACAGT
TATTCTCATC CAAATTTTGA ACAGTTAACA TTAGAGCAAT GCATAAGTGA AGTTGAGAAG
ACAGAGGAGT TAATCAATGA GCTATACAAA AAAGCAGGTG AAGTAAGAAA GTTTAAATTA
TTCCGATTTC CGTATGGAGC AAGAAAACTT AATGAATCGA AAGAGTTTCA GGAGTATTTA
AAGAATCAAA GGTTTTGTAA ATTGGATGAT ATGCACATAA CGAGTGAGTG GTATGATAGG
GAAGGTTTGA TAGAAGGCGT CGATGTTTTG TGGACCTATG ATTTTACAGA ATATCGCATT
CAAAATGATA CTTCCCTGAC CTATGATGAT CTTGTTGCAC GCATACACGA AAAGAAACAA
GGAAGCAGTG ATTCACTTCT TAATGAGGGA AGCAGACATA TCGTATTATT ACATGATCAC
GAGGAAACAA ATGCTGTAAT TTCAAGGTAT TATCAGAAAT TTCTTGATTA TGTTATGTTG
CATGGGGTAG ATTTTATTGA ACCGGAGTTC CGATATCTGT CCTAA
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| Protein sequence | MSVGYLTMDD GPSDITRDII DYLTGRGIKP VFFFTGQNIE KRMEEGVYAI KKGAIIGNHS
YSHPNFEQLT LEQCISEVEK TEELINELYK KAGEVRKFKL FRFPYGARKL NESKEFQEYL
KNQRFCKLDD MHITSEWYDR EGLIEGVDVL WTYDFTEYRI QNDTSLTYDD LVARIHEKKQ
GSSDSLLNEG SRHIVLLHDH EETNAVISRY YQKFLDYVML HGVDFIEPEF RYLS
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