Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_0296 |
Symbol | |
ID | 5744219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 369348 |
End bp | 371276 |
Gene Length | 1929 bp |
Protein Length | 642 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641291386 |
Product | DNA topoisomerase (ATP-hydrolyzing) |
Protein accession | YP_001557422 |
Protein GI | 160878454 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAAT ACAATGGCAG TCAAATTGTA GTACTGGAAG GCTTAGAAGC CGTTAGGAAA CGACCTGGTA TGTACATCGG TAGTACTGGT ACAAGAGGTC TACACCACCT TATATGGGAG ATTCTTGATA ATGGTATTGA CGAGCATTTA GCGGGTTTTT GCAACCAGCT TGAGATTACT TTACTAAAAG ATGGCGGAAT TTCCATCGCA GATCATGGTC GAGGAGTTCC TGTCGACATC CATCCAACAA AAAAAATACC TACTGCACGA GTTGTCTATA CGATACTCCA TGCCGGCGGT AAGTTTGGAG GTTCCGTATA CAAAGTATCC GGAGGTCTTC ACGGTGTAGG TGCTTCCGTC GTAAATGCAC TTTCCACTCG TATGATTGTA GAAATTAGAC GAGATGGGAA AATTTATCGT GATGAATATG AGCATGGCGG ACATCCATGT GTAGAACTTG AGAACGGAAT GTTACCTGTC GTTGGAAAGT GTAACAAATC TGATACTGGC ACAAAAGTAA CCTTTTATCC AGATCCAACT ATTTTTGAGA CAGTAGAATT TAAAGCAGAA ACCATAACAA AAAAACTAAA AGAAGTGGCA TTTTTAAATA AGAACTTATC CATCGTATTT TACGATCAGA ATACTGGGTT TAAGAAAACC TATTGTGAAG AGTTCGGTAT TAAAAGTTTT GTTTCCTATA TTAACCGAGA GGCTTCCGTA ATCCACGAAG AACCCATCTA TATTGAAGGA AAGAGCGGAG ACATCGAAGT TGAAGTTGCG CTTCAATATA CGAATAGTTT TTCAGAGCAA ATTAATGCTT ATTGTAACCG AATCAACGTT GTTGATGGTG GTACCTTAGT AACTGGATTT AAAACCGCTC TAACACGTGT CATGAATCAA TATGCAAGAG AACTTGGCGT ACTGAAAGAA AAAGATGAAA ATTTTGATGG AAAGGACATT CGTAATGGAC TTGTAACCAT CATATCAATA AAGCATCCTG ACCCTCAATT TGAAGGACAG ACCAAAACAA AACTTGGTAA TACCGATGCA AAAAGTGCAG TCGAAGATGT TTTTTCTGGG GAAGTAACCA GATTTTTTGA TAAAAATGTG GAGATTTTAA AGGCTATTTT AGAAAACTCA ATGCGCTCCT ACACGGCTAG AAAGGCCAGT GACAAAGCAC GTAGCGCTGT ACTAAAGCAA CTAAATGACA TTGACACCAA GAGTAAACTT GCTTCATGCT CCTCTAAAAA ACCAGAGGAA TGTGAAGTGT ATATCGTAGA GGGTGATTCC GCGGGAGGCA CTGTAAAAAC AGCAAGAAAT CGTCGTACAC AAGCAGTTCT TCCGCTACGT GGTAAAATCA TTAATGTTGA AAAAGCAACA TTGGAAAAGA TCTTAGTTAA TAATGAAATC AAATCCATGA TTGCTTCCTT TGGTTGTGGA ATTGGCGAGG ATTTTGATAT CTCAAAATTG CGTTACGATA AAATTATTAT CCTAACGGAT GCCGATGTCG ATGGAGCACA TATTAGTACC TTACTTCTCA CCTTTTTCTA TCGATTTATG CCAGAGCTCA TTATGGAGGG AAAAATTTAC CGCGGACTTC CACCACTATA CCGTGTAGAA TATGAAACTT CGGAAGGAAA GAAGAAAAAG AAGTTTGAAT ATATCTACAA TGATTTCGAA TTGGACAAGT TTAGAAAAAA TACCAAGCAT AAAATAATTC ATATACAGCG TTACAAAGGA CTTGGTGAAA TGGATGCAGA GCAGTTGTGG GAAACCACCT TAAATCCAGA AACAAGAGTA TTGGCACAAG TATCCATCAC AGATACTGTC GATGCAGACG AAACTACAAC ATTGCTAATG AGTAATAATG TACCTCCACG TCGTGCATTT ATCATGGACG AAGCAAAATA TGCAAAACTT GATATATAA
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Protein sequence | MEQYNGSQIV VLEGLEAVRK RPGMYIGSTG TRGLHHLIWE ILDNGIDEHL AGFCNQLEIT LLKDGGISIA DHGRGVPVDI HPTKKIPTAR VVYTILHAGG KFGGSVYKVS GGLHGVGASV VNALSTRMIV EIRRDGKIYR DEYEHGGHPC VELENGMLPV VGKCNKSDTG TKVTFYPDPT IFETVEFKAE TITKKLKEVA FLNKNLSIVF YDQNTGFKKT YCEEFGIKSF VSYINREASV IHEEPIYIEG KSGDIEVEVA LQYTNSFSEQ INAYCNRINV VDGGTLVTGF KTALTRVMNQ YARELGVLKE KDENFDGKDI RNGLVTIISI KHPDPQFEGQ TKTKLGNTDA KSAVEDVFSG EVTRFFDKNV EILKAILENS MRSYTARKAS DKARSAVLKQ LNDIDTKSKL ASCSSKKPEE CEVYIVEGDS AGGTVKTARN RRTQAVLPLR GKIINVEKAT LEKILVNNEI KSMIASFGCG IGEDFDISKL RYDKIIILTD ADVDGAHIST LLLTFFYRFM PELIMEGKIY RGLPPLYRVE YETSEGKKKK KFEYIYNDFE LDKFRKNTKH KIIHIQRYKG LGEMDAEQLW ETTLNPETRV LAQVSITDTV DADETTTLLM SNNVPPRRAF IMDEAKYAKL DI
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