Gene Cphy_0180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_0180 
Symbol 
ID5745048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand+ 
Start bp225379 
End bp226032 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content35% 
IMG OID641291270 
Producthypothetical protein 
Protein accessionYP_001557306 
Protein GI160878338 
COG category[S] Function unknown 
COG ID[COG5658] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TGTTTCATCA GGATAATTAT AAGCTATGGC TGATTGCTAT TATCGCATTG 
CTTATTGCAA TAATTGCATA TCCATTTTTA CCCGCGGAGA TCCCTTTCCA CTTTGGCGCT 
AACGGGGAGG TGGACCAATA TGGAGGACCA TGGACGATAT TTTTAATGCC AGCGATTATT 
ATAATTCTTA TCGTTTTAGC TGAACTACTT CGTATTATTG ATCCGAAGAG ACAATCCTAT 
GCTAAATTCT CAAGGCATTA TTATGGGGTA TATTTCTTAA TCTCCCTGTT GTTTATGTTC 
TTGGAAATCT ATATTATCGC AATGAGTTTT GGGATTGAGG TAATGAATAT CAATCATCTT 
ATGCCTGCTA TTATTGGTAT ATTGTTTTTG GCACTTGGTA ATAGTATGCC AAAATTTAAG 
CATAATTACT TTTGTGGGAT AAGAACTTGC TATACATTAG CAAATGAGGA TGTTTGGTTT 
ATGACCCATC GTTTTGCGGG TAAGCTATGG TTTCTTGGAG GTTTTTGTAT GATATTAACC 
ATATTGTTAC CAGCCAAAGC TAATTGGATC GTTTCCTTTA TAATCGTTGC AATTCTTGGA 
ATCATACCGG TTCTGTATTC ATATTTTGCA TATCAACGTA TAAATAAGAA ATAG
 
Protein sequence
MKKLFHQDNY KLWLIAIIAL LIAIIAYPFL PAEIPFHFGA NGEVDQYGGP WTIFLMPAII 
IILIVLAELL RIIDPKRQSY AKFSRHYYGV YFLISLLFMF LEIYIIAMSF GIEVMNINHL 
MPAIIGILFL ALGNSMPKFK HNYFCGIRTC YTLANEDVWF MTHRFAGKLW FLGGFCMILT 
ILLPAKANWI VSFIIVAILG IIPVLYSYFA YQRINKK