| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0156 |
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| Symbol | |
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| ID | 5744310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 202257 |
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| End bp | 203633 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641291248 |
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| Product | PDZ/DHR/GLGF domain-containing protein |
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| Protein accession | YP_001557284 |
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| Protein GI | 160878316 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.21731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACGA AGACACCTGA ACCTGAGAAA GAGTTTCGCT TTATTCAGGA AAAAGTAGTA
CCGAGGAGGA AACACAGGGT TAAGAAAATG GCGTATGCCA CTGCCTTTGC TGTGGCTCTC
GCAATTATTT TTGGCTTGGT GGCAAGATAT GTATTCATAA AATCCGATCA TTTTTGGATT
AAGGTGCTTG GAATTGATAC GACTAAAAGA GAACCGATTA CTTTTCCGTC CGAGGGGCAA
GAGGATCCTA ATGGAGTTGA CGGAACTGGA GAGAATGTTA CAATAACACC GAGTATCAGT
ACGACACCAG AACCAACTGT TTCTGTGACA GGGGCCCCAA GCGAGGGGAA CGGGGATCAA
GAGACGGTTG TTGAGAAGAA GATAGAAGCA ACCATAGAAG ATTATGAACG TATGCTATTT
GAACTAAGGA AGGTTGGTAC TACGGCTATG AGTGGTTTGG CTATGGTAAC AGCCATAGAA
AATCGAGTAG ATTGGTTTGA TGAAACGTAT GAAACCAAAC GCACTACTAC CGGTATCGTA
ATTGGTGAAA ATAGTGCAGA GATACTTATC CTAACGAGTC TAGATAAGAT TAATGGTGCA
AGTGATTTAG AAGTAACATT TAATTCTGGT TTTACCGCTT CTGGACTTAC CGTTCCCGGT
AAACTGTGGT CTTTTGATAA AGATTATAAC CTAGCAGTGA TTGCGGTTAA ATTAAAAGAT
ATACCACCAC AGCAAGTGTC ATCAATAAAG ACTGCGAAAC TTGGAGAATC CCATTCAGTT
ACGCTTGGTA CGCCAGTGAT TGCACTTGGT AAGCCTGATG GATATTTTGG CTCAATGATG
TTTGGTATGA TCTCTAGCAG AGGTGATTAC TATTACATTA TGGACAATCG CCTTGATGTA
TTTCATACTG ATTTGAATGT AAATAGTAAC AGTGATGGTG TCATTATTAA TACAAATGGT
GAGATTATTG GTATCATGAC TCAAGCGATG AAGGATCCCG CAAATCCGAA TGTAAGTACA
GTGATTGGTA TCTCTAGGCT AACATCAATC ATGGACAAAT TAGCTAATAA AACTGAGAGA
GTTACTTTTG GAATTATTGG TGAAGATATT CCTTCCGATG TCTTACAATC GTTTAATCTT
TCAGGAGGTA TTTATGTTAC AGAAGTTCGT TCTGATTCAC CAGCATTTAA TGCAGGGATT
AAGCAGGGAG ATATTATTAC TCAGGTTAAT GAATTCTCAA TTTCTTCCGT AACTAATTTC
AATACTATAT TAAATAATTA TAAGCCGAAA GAAACTGTAA CTGTTGTTGT TCAACGAAAG
GTTAAGCAAG AGCTTTCGGA AAGTAGTGTT AAGGTGGTAC TGGAACTAAA AGAATAG
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| Protein sequence | METKTPEPEK EFRFIQEKVV PRRKHRVKKM AYATAFAVAL AIIFGLVARY VFIKSDHFWI
KVLGIDTTKR EPITFPSEGQ EDPNGVDGTG ENVTITPSIS TTPEPTVSVT GAPSEGNGDQ
ETVVEKKIEA TIEDYERMLF ELRKVGTTAM SGLAMVTAIE NRVDWFDETY ETKRTTTGIV
IGENSAEILI LTSLDKINGA SDLEVTFNSG FTASGLTVPG KLWSFDKDYN LAVIAVKLKD
IPPQQVSSIK TAKLGESHSV TLGTPVIALG KPDGYFGSMM FGMISSRGDY YYIMDNRLDV
FHTDLNVNSN SDGVIINTNG EIIGIMTQAM KDPANPNVST VIGISRLTSI MDKLANKTER
VTFGIIGEDI PSDVLQSFNL SGGIYVTEVR SDSPAFNAGI KQGDIITQVN EFSISSVTNF
NTILNNYKPK ETVTVVVQRK VKQELSESSV KVVLELKE
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