| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2561 |
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| Symbol | |
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| ID | 6376259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2733283 |
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| End bp | 2735046 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642685039 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_001960936 |
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| Protein GI | 189501466 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA ATTCTGTCAT AGGACTTGTG CTGATAGGCC TTATTATGAT TGTTTGGATG
CAGTTCATGG CTCCTGAAAA TAAGCCTGTG CCGGAGAGAA TGACGGCGGA TGTTACCGGG
GTGGAAGAAA CATCAGCAAA AAGCGGCACG GGCTCTCCGG CAGTCGCGGT TTCCGCTGTT
CCTGAGACCT TTGGTGAGTT TTCCGCTGCG ACGGAAGGAG AGGAAAAACT TCTGACCATC
GATAACGAGC TGTTCACGGC CGTGCTCTCC TCAAGGGGAG CGACCCTGAA GTCCATGGTG
CTCAAGAAAC ACCTCAACGC AAACAGAGAG CGGTTTGACC TGATTAAAAA CAGTGACAGC
GGAGCATTGT CGCTTTTTTT CCAGACCAGT GATGGAAAGA ACATAGACAC AAGGGATCTC
TACTTCGAGC CTTCGGATAC TCAGAAGACA GTCTCCCTTA CCGGTGAAGA ATCCTATACC
GTAACCTATC GGCTCGATGT GGCCCCTGAA AAAAGTATCA CTATTGTCTA CACCTTCACT
GGTGATGTCT ATGGAATAAA CTATGATGTG CAGTTTACCG GTTTTGACGG CGTGCTTCCG
GGCAATGAGT ATCAGCTTGA ATGGGACGGA GGCCTGCTCT ATTCAGAAAA AAACATTGAT
GATGAGCTGC AGAACTCATG GGCATCAGCC TACATGGGCG GAAGTCTTCT CAAGCTGGAC
GCCAGCGACC CGTCAAAAGA ATATCGGGAA GAGCAGTCAG GTGTTGCCGG ATGGATCGCT
GTACGGTCAA AATATTTTGT GGCGTCGCTT ATTCCATCTT CGCCTACAGA CGGCGTCTAT
CTGAAAGGGA GCGGAAAGCC GGGAGAAAAG TTTGAAGACT ATACGGCAGC GCTGAAGTTT
ACCCTGCCCC AGAATGAGAA GACGCATAGC GAGTCCCTTG TGCTTTTTGT CGGCCCGGTT
GACTATAACG TGCTGCATTC GCTAAACGTG AATCTTGAAA AGATCATGGA TTTCGGTTGG
GACTGGCTGA CGCGCCCGTT TGCGGAGTAT ATCATTCTTC CTATTTTCGA TCTGCTCAGC
AAGCTCACAT CCAATTACGG GCTGATCATC ATTATTTTTG CTCTGCTGAT CAAACTGGTG
ACCTATCCGT TAACCATGGC ATCGACGAAG TCGATGAAAA AGATGGCAGC GCTCCAGCCG
ATGATGAAAG AGCTGCAGGA AAAGTACAAG GACAATCCCC AAAAAATGCA AAGCGAGCTC
GGGAGGATAT ACAAGGAAGC CGGAGTCAAT CCACTGGGTG GGTGCCTCCC GGTTCTTCTG
CAGATGCCGC TGCTTTTCGC TATGTTTTAT GTGTTTCGTT CTTCCATAGA GCTTCGTCAG
CAGTCGTTCC TCTGGGCGAA AGATCTATCG CTTCCGGATT CAATTCTGGA CCTTGGGTTC
AGCATACCGC TTTACGGGGA CCATATTGCC TTGTTCCCGA TTCTTATGGG GGGAGCGGTT
TATCTGCAGC AGAAGATTAC GCCTACGGCT CAGAGCAATG ACCAGATGAA GGCCATGCTG
TATATTTTTC CGGTCATGAT GCTGCTCTTT TTCAACAATC TTCCGGCAGG ACTGGGGCTC
TATTATCTGA TGTTCAACGT TTTCAGCATC GCCCAGACCT TCTACATCAA TAAAACCAGC
TCTGCTGATG ATCTGCCCAA GATCAGTCTC GAAAAGCAGG GACAAAAACC TCAGAAAAAG
AAAAAGGGCG GTAAAAAACA ATAG
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| Protein sequence | MDKNSVIGLV LIGLIMIVWM QFMAPENKPV PERMTADVTG VEETSAKSGT GSPAVAVSAV
PETFGEFSAA TEGEEKLLTI DNELFTAVLS SRGATLKSMV LKKHLNANRE RFDLIKNSDS
GALSLFFQTS DGKNIDTRDL YFEPSDTQKT VSLTGEESYT VTYRLDVAPE KSITIVYTFT
GDVYGINYDV QFTGFDGVLP GNEYQLEWDG GLLYSEKNID DELQNSWASA YMGGSLLKLD
ASDPSKEYRE EQSGVAGWIA VRSKYFVASL IPSSPTDGVY LKGSGKPGEK FEDYTAALKF
TLPQNEKTHS ESLVLFVGPV DYNVLHSLNV NLEKIMDFGW DWLTRPFAEY IILPIFDLLS
KLTSNYGLII IIFALLIKLV TYPLTMASTK SMKKMAALQP MMKELQEKYK DNPQKMQSEL
GRIYKEAGVN PLGGCLPVLL QMPLLFAMFY VFRSSIELRQ QSFLWAKDLS LPDSILDLGF
SIPLYGDHIA LFPILMGGAV YLQQKITPTA QSNDQMKAML YIFPVMMLLF FNNLPAGLGL
YYLMFNVFSI AQTFYINKTS SADDLPKISL EKQGQKPQKK KKGGKKQ
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