Gene Cphamn1_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2532 
Symbol 
ID6376230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2703453 
End bp2703956 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content48% 
IMG OID642685010 
Producthypothetical protein 
Protein accessionYP_001960907 
Protein GI189501437 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.910808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGAG AGTTCATTGT TGACGGATAT AATCTGCTGC ATAAACTTTT CCCTGAAAAG 
GCGCAGGGTT CCCTGCAGCA CAAGCGCGAA AAGACAGAAC GTATGCTGCT CGGCTTTCAG
CAGTCAACCC GCTGGAAAGT CACCATTGTC TATGACGGCC AGCATTCCCG GGCTCCCTTT
CAGGACTCAG GAGCGCTTAA CAGGGTTTTT ACCGCTTCAG GAGGTTCTGC GGATGAATGG
ATCATTGATT ATCTGAAATC TTTGGGAAGC AATGCTCAAA TGTTTACTAT TATTTCTTCC
GACCGCTTTA TCTGCCGCCA CGCCTCCGCC CGGGGAGCAT CATATATGCT CTCTGAAGAT
TTTATCCGGC AGTACCTCTC AGGAAAAGAT CGTCGGGACA AAACCGGAAA AAACGGCAGC
AACAAGGAAA AATCCAGTGA CGTATCACTC AGCCGGAAAG AGGTTGACCA CTGGCTGAGC
ATTTTCGGCA AAACAGAAGA ATGA
 
Protein sequence
MFREFIVDGY NLLHKLFPEK AQGSLQHKRE KTERMLLGFQ QSTRWKVTIV YDGQHSRAPF 
QDSGALNRVF TASGGSADEW IIDYLKSLGS NAQMFTIISS DRFICRHASA RGASYMLSED
FIRQYLSGKD RRDKTGKNGS NKEKSSDVSL SRKEVDHWLS IFGKTEE