| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2379 |
|---|
| Symbol | |
|---|
| ID | 6376074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2545023 |
|---|
| End bp | 2545514 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642684860 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_001960758 |
|---|
| Protein GI | 189501288 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.54331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATAC TTGCCGCCCT TGACTTATCC GACGTGACCG ATAACGTAGT CTCCAGCGTA
CGAAAAATTG CTCACGCATC ATCTTCAACA GTAATCCTGC TTCACGTTCT GCCCGAGGAG
GGACAGGAGA TTGATCTCCA CCCAACTATC GATCCTCATT ATCATCCCCC TGAAAAATAC
TACCATCAGC CCGATTCTTC TGAAGAGGGT GAACGTGTCC CGATTCTGCA TGATCGGAAT
TTCAAAATCC TGCAGAACAT CTCGGATGAC CTCAACAATT ATGGAGTTGA AGCCAAGGTC
TCCCTGGTTC ACGGTAATGC CTTACAGGTG ATTGTCGAGC AGGCTGAAAA AGAACAGGTT
GACCTGATCA TTCTCGGTTC ACACGGTCAC AAAAACCTCT ACCATTTTTT TGTCGGTTCC
GTCTGCTCAG GCTTGGTGAA TGAAACCAGC GTCCCTGTGG TTATTGTGCC CAAAGCACTG
AAAAAACAGT AA
|
|---|
| Protein sequence | MRILAALDLS DVTDNVVSSV RKIAHASSST VILLHVLPEE GQEIDLHPTI DPHYHPPEKY
YHQPDSSEEG ERVPILHDRN FKILQNISDD LNNYGVEAKV SLVHGNALQV IVEQAEKEQV
DLIILGSHGH KNLYHFFVGS VCSGLVNETS VPVVIVPKAL KKQ
|
|---|
| |