| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2208 |
|---|
| Symbol | |
|---|
| ID | 6375902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2394990 |
|---|
| End bp | 2395691 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642684695 |
|---|
| Product | Mg-protoporphyrin IX methyl transferase |
|---|
| Protein accession | YP_001960594 |
|---|
| Protein GI | 189501124 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | [TIGR02021] magnesium protoporphyrin O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.44599 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC CATCATCGTT CAATGCGAAA GAACACCAGA ACATGCTCCG TTCCTACTTT
AACGGCAACG GATTCAACCG CTGGTCATCC ATTTACGGAA ATGAAAAGCT GTCGACGGTA
CGAACGACAG TCAGGCAGGG ACACGCGGTC ATGATGGACA AGGCTTTTGA GTGGCTTCAG
CAACTCAATC TTCCTGAAGA CGCCACGATT CTGGATGCAG GATGCGGAAC AGGACTTTTC
AGCGTTCGAC TTGCCGGGAA TGGTTACCAT GTCAAAGCTG TTGACATCGC AGCCCAGATG
GTTAACAAAT CCCGTGAAGA AGCTACGGCA AAAGGCCTGC AGGAAAAGAT TGATTTTGAG
GTAAACACGA TAGAGGAGGT CAAAGGGATG TATGATGCTG TCGTCTGTTT TGACGTGCTC
ATCCACTATC CCGCGGAAGG ATTCATGGAA GCATTCAAAA ATCTTTCGAA CCTTACCAAA
GGGCCGATTA TTTTCACCTA CGCTCCTTAC AATAAAATAC TCGCTCTGCA GCACTGGATA
GGCGGCTTTT TCCCGAAAAA AGAGAGGAGA ACAACGATTC AGATGATCAC TGATGAAAAT
ATGAACAAAG CAATGGAAAA AAACAGAATG TTCGTAAAAA GCAGGCAGAA AATCAGTTTC
GGTTTTTACC ATACAATGCT TATGCACGCC GAAAGGAAGT AA
|
|---|
| Protein sequence | MSNPSSFNAK EHQNMLRSYF NGNGFNRWSS IYGNEKLSTV RTTVRQGHAV MMDKAFEWLQ
QLNLPEDATI LDAGCGTGLF SVRLAGNGYH VKAVDIAAQM VNKSREEATA KGLQEKIDFE
VNTIEEVKGM YDAVVCFDVL IHYPAEGFME AFKNLSNLTK GPIIFTYAPY NKILALQHWI
GGFFPKKERR TTIQMITDEN MNKAMEKNRM FVKSRQKISF GFYHTMLMHA ERK
|
|---|
| |