| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2178 |
|---|
| Symbol | |
|---|
| ID | 6375872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2356408 |
|---|
| End bp | 2357808 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642684665 |
|---|
| Product | Cysteine synthase |
|---|
| Protein accession | YP_001960564 |
|---|
| Protein GI | 189501094 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG0031] Cysteine synthase
[COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
|---|
| TIGRFAM ID | [TIGR01137] cystathionine beta-synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAGC AGAACATTTT TATGAATACA GGTCAGACAC CCATGGTACT GATCGATCGT
TCAGCCCGGC ATGTATCGCC GCAGATCCTG GCGAAGGTAG AGTACCTGAA TTCCTCAGGG
TCCCATTACT GTCGTGTTGC AAACACCATT GTCGATCATG CTGAAAAAGA AAAGCTTGTC
GAGTCGGGCA TGACCCTTGT CGACTGGACC AACGGAAGCA GTGGAATCGC TCTGGCGATG
GCGGCTGTAA CAAGGGGTTA CAAGGTGCTG CTGGTTGTTC CTGACAGGAT TTCACGCGAA
AAGCAGCAAC TGCTCAGGGC GCTTGGTGCT GAAATAGTCA TAACGCCCTC TGATGCCAGG
CCGGGAGAAC CGCGCAGCTG TGTCAATGTC GCGGAAAATC TCGTTCAGAA CCTGCCCCAC
GCCTTTTTTA CCAACATGTA CGAGAACGAT CTGAACCGCC AGGTGCATAG AGAAAATACC
GGTCCGGAAA TATGGGAACA GACTGAAGGT CGTGTCACTC ACCTGTTCGT TCCTGTTCTC
TCCGGCGCGA TGATTTCAGG TCTCGGCAGA TTTATGAAGG CAAAACGTTC CGAAGTCAAG
GTTATCGGTG TTGAGCCTGA AGGTTCAGTA TACCGTGAGC TTTTTCATAC AGGCAGAGCG
GGCGAGGCTT CTCTTTACGA GCTTGAGGAG GCGGGAGGAC TGTGGAAGTC GAACTGCTGG
GATGCGGACG TTATTGATGA TATTGTACAG GTAAGCGACC GTGACGCTTT CAACTGCGGA
CGCGAATTGC TCAGGAACGA TGCGATTTTT GCGGGAGGAT CTTCCGGTGC GGTGCTGTTT
GCCTCCTTGC GTGCAGGCGC CCTTCTGGAT GAAAGCGCGG TGATCGTTTC GGTGCTGAGT
GATTACGGCG GCTATTATCT CAGCAAGATG TACAATGATG AGTGGATGAA GCAGAAGGGC
TTTTACCGAA AAGCCTCTTC TCCGACAGAC GAGATAACAG CTGAAGATGT CGTCGGTTTG
AAAACCAGAA AAGAGCTTAT TTTTGCACAT CCTGAACATA CGCTTTCAGA GGTGTTCGAG
ATGATGCGGC AGCATGATGT CTCTCAGGTT CCTGTTGTGT CTTACGGAAC GGCAATCGGA
AGCATCAGCG AAAACAAGAT TCTCTCCATT CTGATAGAGA ATGATGAGGC TATGAATTCC
AAGGTTGTCG GATATATGGA GCAGTCTTTT CCCGTATGTG ACGCGCAGAC AACTATTTCC
GAACTTTCAG AAAAGCTGCA GGTAAGTGCT TCAGGAGTGC TGATAACCCT TTCTGACGGT
ACACTGCAAC TGCTCACCAA ATCGGATCTC ATCGAAGCGT TGACGCAGAA ATCATTGTTG
CGTCAATCGA AGAACAGTTG A
|
|---|
| Protein sequence | MWQQNIFMNT GQTPMVLIDR SARHVSPQIL AKVEYLNSSG SHYCRVANTI VDHAEKEKLV
ESGMTLVDWT NGSSGIALAM AAVTRGYKVL LVVPDRISRE KQQLLRALGA EIVITPSDAR
PGEPRSCVNV AENLVQNLPH AFFTNMYEND LNRQVHRENT GPEIWEQTEG RVTHLFVPVL
SGAMISGLGR FMKAKRSEVK VIGVEPEGSV YRELFHTGRA GEASLYELEE AGGLWKSNCW
DADVIDDIVQ VSDRDAFNCG RELLRNDAIF AGGSSGAVLF ASLRAGALLD ESAVIVSVLS
DYGGYYLSKM YNDEWMKQKG FYRKASSPTD EITAEDVVGL KTRKELIFAH PEHTLSEVFE
MMRQHDVSQV PVVSYGTAIG SISENKILSI LIENDEAMNS KVVGYMEQSF PVCDAQTTIS
ELSEKLQVSA SGVLITLSDG TLQLLTKSDL IEALTQKSLL RQSKNS
|
|---|
| |