Gene Cphamn1_2146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2146 
Symbol 
ID6375840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2321628 
End bp2322443 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content34% 
IMG OID642684636 
Productglycosyl transferase family 2 
Protein accessionYP_001960535 
Protein GI189501065 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.125648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTT CTGTTTTGAT GTCAATATAT AAAAATGCAC AACCTAAATG TTTGCAAGAA 
GCAATAGACA GTGTTCTCAA TCAAACACTT GTACCTGCTG AAATTGTAAT AATAATTGAT
GGCAAAGTGC CTGAAGGTAT AGAAGCGGTG TTAAATAAAT ATAGAAATCA ACATGACGAA
CTATTCAATA TAATTCAATT AGAACAAAAT ATGGGGCTTG CCTTAGCATT AAGGCATGGA
GTTTTAAACT GCAAACACGA TTTGATCGCC AGAATGGATC AGGACGATAT CTGTAGAGAG
GACAGGTTTG AAAAAGAGAT TTCTTTGTTT ACTGCAGATG ACAGTATAAG TATGGTGGGT
TCTTATGCCG CAGAATTTTA TGAGGATACA AGCCAAATTA AATCTATACG CAAGGTTCCT
TTGGATTTTG ACGAAGTCAA GAAATTTGCC AAAAAAAGAA ATCCTATGAA TCATATGACA
GTTCTTTTCA AAAAGAAGGC TGTGCTTGAT TGTGGCAACT ACAAAGATTT TCTGGAAAAC
GAAGACTATC ATCTTTGGGT CAGGATGATA ATGAAAGGGC AGAAAATAGT CAATATACCA
GAGCCGCTAG TATATGTCAG GACCGGACCT GATATGTATA AAAGAAGAGG CGGCCTAAGG
TATGCCAAGC GAGACTATAT ATTGGAAAAA GAATTTTACA ATATGGGATT TATTACCCTT
TACGAAATGA TTCTAAATCT TATACTGAGA ATACCTGTGA GATTGATACC AAATAAATTA
AGAGAATTTA TTTACTTAAA ATATCTCAGG AAATAG
 
Protein sequence
MKFSVLMSIY KNAQPKCLQE AIDSVLNQTL VPAEIVIIID GKVPEGIEAV LNKYRNQHDE 
LFNIIQLEQN MGLALALRHG VLNCKHDLIA RMDQDDICRE DRFEKEISLF TADDSISMVG
SYAAEFYEDT SQIKSIRKVP LDFDEVKKFA KKRNPMNHMT VLFKKKAVLD CGNYKDFLEN
EDYHLWVRMI MKGQKIVNIP EPLVYVRTGP DMYKRRGGLR YAKRDYILEK EFYNMGFITL
YEMILNLILR IPVRLIPNKL REFIYLKYLR K