Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2146 |
Symbol | |
ID | 6375840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2321628 |
End bp | 2322443 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642684636 |
Product | glycosyl transferase family 2 |
Protein accession | YP_001960535 |
Protein GI | 189501065 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.125648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTT CTGTTTTGAT GTCAATATAT AAAAATGCAC AACCTAAATG TTTGCAAGAA GCAATAGACA GTGTTCTCAA TCAAACACTT GTACCTGCTG AAATTGTAAT AATAATTGAT GGCAAAGTGC CTGAAGGTAT AGAAGCGGTG TTAAATAAAT ATAGAAATCA ACATGACGAA CTATTCAATA TAATTCAATT AGAACAAAAT ATGGGGCTTG CCTTAGCATT AAGGCATGGA GTTTTAAACT GCAAACACGA TTTGATCGCC AGAATGGATC AGGACGATAT CTGTAGAGAG GACAGGTTTG AAAAAGAGAT TTCTTTGTTT ACTGCAGATG ACAGTATAAG TATGGTGGGT TCTTATGCCG CAGAATTTTA TGAGGATACA AGCCAAATTA AATCTATACG CAAGGTTCCT TTGGATTTTG ACGAAGTCAA GAAATTTGCC AAAAAAAGAA ATCCTATGAA TCATATGACA GTTCTTTTCA AAAAGAAGGC TGTGCTTGAT TGTGGCAACT ACAAAGATTT TCTGGAAAAC GAAGACTATC ATCTTTGGGT CAGGATGATA ATGAAAGGGC AGAAAATAGT CAATATACCA GAGCCGCTAG TATATGTCAG GACCGGACCT GATATGTATA AAAGAAGAGG CGGCCTAAGG TATGCCAAGC GAGACTATAT ATTGGAAAAA GAATTTTACA ATATGGGATT TATTACCCTT TACGAAATGA TTCTAAATCT TATACTGAGA ATACCTGTGA GATTGATACC AAATAAATTA AGAGAATTTA TTTACTTAAA ATATCTCAGG AAATAG
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Protein sequence | MKFSVLMSIY KNAQPKCLQE AIDSVLNQTL VPAEIVIIID GKVPEGIEAV LNKYRNQHDE LFNIIQLEQN MGLALALRHG VLNCKHDLIA RMDQDDICRE DRFEKEISLF TADDSISMVG SYAAEFYEDT SQIKSIRKVP LDFDEVKKFA KKRNPMNHMT VLFKKKAVLD CGNYKDFLEN EDYHLWVRMI MKGQKIVNIP EPLVYVRTGP DMYKRRGGLR YAKRDYILEK EFYNMGFITL YEMILNLILR IPVRLIPNKL REFIYLKYLR K
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