Gene Cphamn1_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2054 
Symbol 
ID6375747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2217136 
End bp2218359 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content46% 
IMG OID642684545 
Producthypothetical protein 
Protein accessionYP_001960445 
Protein GI189500975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.247121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0331118 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCC AACAGGAATC AAACTTGCAG GTCACAGAGA AACCTCACTG GAAAATCGAC 
CATCCCGATC AGAAGTATAC AACGCGCATA AGAAAAATTG GCGATGATAT CCTGTTAACC
TATTACGAGT CTGACGGGGA AATCTGCATC GAAACCAGAG ACCAGTCTCT CTTTCAGATG
GTTCTTGATG AAACAGGGCT CAAAGACAAA CTGGTGTACC TGCTTCGCGA CCTCAGCAAC
GTCAAGGACA TTTCATATAC CTACAAACAG AAACTCACAC GGCTTGTCTA CCAATGGCAG
CCCTATTACA AACTGATCGT TTTTTTCAAT ATCTCCCCTG AATTTGAGAC AACTGTCGAA
ACATTTGCTT CCATTGTCCC TCAAAGCACA CCGGTCCTGA TGGTCGATTC CTACGAAGAC
GCGCTACAGG CTGTAAAAAA CATCAAGTCA GGTATTGTCC CATCCGAGAC GTGTGAAGAC
CATGAAGATG AGCTCTACGT TCTGAGAAAA AAAGAGTTCC TTGCCGCCAC GGCACGAATC
GGCTGGATGA ATATGCTCAA TCAGCCGATC AACCTGCCTG ACCATGATGA GCTTCTCTAT
CCGTTTTTCA AGGCTCTCGA ATCATTGCAG TCCGATCTGC TGGCAATTGA ACAACTCTCT
GCCGAGGAAA GAAGGCTGGG GGACATAAAG GCCGAGAAAA CTATCTCGGA GAAAAAGATC
CTCCTCAATG CCCAGCTCGA GCTGAATCAT CAGCTTAAAA ATCAGTTCAG CCGGGAGAAA
GCGGCACTGC GTTCCCGTAT CGCCTCGCAG GATATGGAAC TCACAAGAGT CTCCACAGCT
GTAGCGGAAA AAACCGCCAC CTTGCTCTCC CTCAGGGAAA AGATATTCGG ACTGGATATC
GATGCAGCCA TGAAAAAAGA ACTGATCGAT TCATGTTCCA AAATGATAGA AACAGAAACC
ATTGAAAAGC AGATCAATAC AGATCTTTCT GTAACCGACT CTGAATTTCT CTCCAAGCTG
CAGCGTAAAC ATCCGAACCT TAACCAGAGA GATCTGCGAA TATGTCTGCT CATCAAACTG
AACTACGATA CCAGAGAGAT CGCGAGAACA ATAGGTATCT CGACAAGGGG ACTTGAAAGC
ATCCGTTACA GGATGCATAA AAAGCTGGGG CTCTCCAAGC ATCAGTCGAT AAAAAACTAT
CTTACGAATC TTATCATTTC GTAG
 
Protein sequence
MKSQQESNLQ VTEKPHWKID HPDQKYTTRI RKIGDDILLT YYESDGEICI ETRDQSLFQM 
VLDETGLKDK LVYLLRDLSN VKDISYTYKQ KLTRLVYQWQ PYYKLIVFFN ISPEFETTVE
TFASIVPQST PVLMVDSYED ALQAVKNIKS GIVPSETCED HEDELYVLRK KEFLAATARI
GWMNMLNQPI NLPDHDELLY PFFKALESLQ SDLLAIEQLS AEERRLGDIK AEKTISEKKI
LLNAQLELNH QLKNQFSREK AALRSRIASQ DMELTRVSTA VAEKTATLLS LREKIFGLDI
DAAMKKELID SCSKMIETET IEKQINTDLS VTDSEFLSKL QRKHPNLNQR DLRICLLIKL
NYDTREIART IGISTRGLES IRYRMHKKLG LSKHQSIKNY LTNLIIS