| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1664 |
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| Symbol | |
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| ID | 6375350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1793573 |
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| End bp | 1795729 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642684158 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001960064 |
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| Protein GI | 189500594 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.137187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG AACAACCTGA GGGCGGGGTT CAGCAAGAAC CGGTTGTGCA GGATGCACTG
CTTGAATGTC TGATTACCCT TGGCAAAATC CATGATCGGG TTACAGAGCG AAACGCCCTC
AAGGCAGGTC TTCCTTTGCA GAATGGAAAA ATAACTCCGG CACTTTTTTC GAGAGCCGCC
AAGCGTGCCG GTTATACTAC CAAAATTGTC AGGCGCCGGA TTGATTCTCT CAATCCGGCG
CTTTTTCCTG TTATGCTGTT GCTCGACCGT GACGATGCAT GTGTTCTTCA TAGCGCTGAG
AACGGAACGG CTTCAGTAAC CTATTCGGAA CTGCCGGACG CTCCGGTGAG TGTTCCGGTT
TCTGAAATAG AGGATCGGTA CACCGGTATC GCCATATACG TTCGCCCGGT TTTTCGCTAT
GACAGCAGAA CACCGGAGGT CAGAAAGCTC AAAAGACGGC ATTGGTTCTG GAGCGTGATT
GAAGAGAACA AGCCGCTTTA CAGGGATATT CTCATTGCCG CGGTTATGAT AAACCTGTTC
GCGCTGGCTA TGCCCCTGTT TATCAGAAAT GTCTATGACC GGGTACTGCC GAACGTTGCG
ATCGATACGC TCTGGATAAC CGCGTCGGCG GTACTGCTTG TACTGTGTGC AGATGTGATC
ATGCGCCTCA TGCGTGTCTA TTTTATCGAT CTCGCTGCAG GAAGGGCTGA CGTGAAGCTC
TCTTCATCCA TCATGGAAAA GGTGCTTGGG CTGAGAATGG AAAACAGGCC GGCATCGGTC
GGGTCATTCG CTTCAAACCT TCAGGCATTC GAGTTTATCA GGACATTTAT CACTTCGACT
ACCGTAGCTG CTCTGGTTGA TCTTCCGTTT GCGCTTCTTT TTGTGCTGAT TATCGCTCTG
ATCGCATGGC CGCTTGCTAT TCCTGTTCTC CTTGGCGTCG CTCTGGTGTT TCTCTACGCG
GTAACCATTC AGGGCAAGCT TCATGATCTG ACGGAAAAAA CCTACCGTCT CGGCGCGCAA
CGAAACGCGA CGCTCATCGA GAGCCTTTCA GGAATGGAGA CTATCAAGTC TCTCGGAGCT
GAAGGCCGCT TTCAGGCAAA ATGGGAGCAG ATTGTTTCTC ATCTGGTCAG AATAGGTGAG
CAGCTGCGTC TGCTTTCGGC ATCGGTGAGC ACCGGGGCTT ACTGGGTGCA GAATTTTGTG
TCGATCGCCA TTATCATAAC CGGTGTCTAC CTTGTGGCAG CCGGGAACCT GAGCATGGGA
GGCCTGATCG CTGTGTATAT TCTTTCATCG AGGGCGATGG CGCCTGTGAG TCAGAGCGCG
GCGCTGCTTA CCCAGTATCA TCAGGCGGAA ACATCCATGA CGTCGTTGAA CGAGATAATG
GATCGACCAG TGGAGCGTTC TCCTGATGCA GAGTTTGTCA CGAGGCAGAC GTTCAAGGGG
GAAATTGTTT TCAGGAATGT ACAGTTTTCC TATCCGGATC AGGAAAGTGA AGCGCTCAGC
GACCTCTCGT TTCATATCAA GCCCGGCGAG CATGTAGCGG TTCTCGGGAA AGTCGGGTCA
GGTAAAACAA CACTGGAACG ATTGATCTCG GGCTTGTATC AGCCTACGGG TGGAGCGGTA
CTGATTGACG GGGTTGACAG CAGGCAGCTG GACCCTGCCG AGCTTCGCAG AAATCTGGGG
CATGTGCCGC AGGACGTCAT GCTGTTTTTC GGCTCCCTGC GTGAAAATAT CACCATGTCC
TATGCTCAGG CAAGCGATCA GGAGATACTC CGGGCTGCGA GGGTCGGTAC CATCGACCAG
TTTGTCGACA AGCATCCCCA CGGTTTTCAG ATGCAGATCG GTGAACGAGG CGAAAATCTT
TCCGGGGGAC AGCGCCAGGG CGTAGCGATA GCTCGTGCGG TTATTGCCGA TCCGCCGATT
CTCCTGCTTG ACGAGCCGAC TTCTTCAATG GACACTTCGA CTGAAGCGAT TTTTAAATCG
CGCCTGAAAC AGTTCGCCCG GAACAAGACG ATGCTTGTTG TTACTCACCG ATCCTCGCTT
CTTGAACTTG CTGAGAGGGT GCTGGTCATG GATGGCGGCA GGATCGTGGC CGACGGGCCG
AAGGAAAAAG TGCTCGAGGC TCTCAGGAAA GGTCAGATAC GGAGAGCTGA CGCATGA
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| Protein sequence | MDNEQPEGGV QQEPVVQDAL LECLITLGKI HDRVTERNAL KAGLPLQNGK ITPALFSRAA
KRAGYTTKIV RRRIDSLNPA LFPVMLLLDR DDACVLHSAE NGTASVTYSE LPDAPVSVPV
SEIEDRYTGI AIYVRPVFRY DSRTPEVRKL KRRHWFWSVI EENKPLYRDI LIAAVMINLF
ALAMPLFIRN VYDRVLPNVA IDTLWITASA VLLVLCADVI MRLMRVYFID LAAGRADVKL
SSSIMEKVLG LRMENRPASV GSFASNLQAF EFIRTFITST TVAALVDLPF ALLFVLIIAL
IAWPLAIPVL LGVALVFLYA VTIQGKLHDL TEKTYRLGAQ RNATLIESLS GMETIKSLGA
EGRFQAKWEQ IVSHLVRIGE QLRLLSASVS TGAYWVQNFV SIAIIITGVY LVAAGNLSMG
GLIAVYILSS RAMAPVSQSA ALLTQYHQAE TSMTSLNEIM DRPVERSPDA EFVTRQTFKG
EIVFRNVQFS YPDQESEALS DLSFHIKPGE HVAVLGKVGS GKTTLERLIS GLYQPTGGAV
LIDGVDSRQL DPAELRRNLG HVPQDVMLFF GSLRENITMS YAQASDQEIL RAARVGTIDQ
FVDKHPHGFQ MQIGERGENL SGGQRQGVAI ARAVIADPPI LLLDEPTSSM DTSTEAIFKS
RLKQFARNKT MLVVTHRSSL LELAERVLVM DGGRIVADGP KEKVLEALRK GQIRRADA
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