| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1655 |
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| Symbol | |
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| ID | 6375341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1785806 |
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| End bp | 1787158 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684149 |
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| Product | multi antimicrobial extrusion protein MatE |
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| Protein accession | YP_001960055 |
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| Protein GI | 189500585 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.2584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAG ATCGGTTTAC CGATATGCTG CAAGGCAATA TCGTGGCTGT GTTTTTTTAT
CACGCGATAC CCAACGTACT GGGGATGCTT GCGATCTCTT CTTCAGGTAT TGTGGACGGG
ATTTTCGTTG GAAACTATGT GGGGGACAGC GCGCTTGCGT CGATCAATCT CATTATGCCG
GTGTTCAGTC TTCTGCTCGG TGTAGCAGTG ATGTTTTCAG TCGGGGGGAT GGTGCGCTGC
GGCAAGTATA TAGGGGAGTC GAACAGAGAT GCTGCCAACG CCGTTTTTTC AAAAACACTG
ATAACGGTTT CTCTCGTAAC GCTTTCGCTT GCGTTTTCAG GTCTATTGTT TATCGATCGG
CTTGTTGTTA TGCTTGGGGC AAATGAAATC CTTGCGCCTC TGGTTCATGA GTATCTGTAT
ATCCTGCTTC TCTTCATGTT CTTTCTGCCT GTGAGCCTCT GTCTTGCGTT CTTTGTCAGG
GTAGATGGTC AGCCTTTGCT CGCTGCGGCA GCAATCATTT CCGCGGCGAT TGTCAATATT
TTCTTCGACT GGCTTTTCGT CGCTTCATGG GGTATGGGGC TACGGGGAGC GGCTCTTGCT
ACAGGCCTCG CCAATATTAC CAGCTTTCTT GTGCTGATGA TTCATTTTTT TGCGAAAAAA
TCTCTTTTGC GGTTTTCGTG GTATCAGCAG GAGTGGCGGG AAATGATACA TGTCGCCTAC
AACGGTATGT CGGAATTTGC CAATCAGCTC TCAGCCGCGA TTGTCATTCT TGTTTTTAAC
TGGATTATGA TCGGGCGCTT TGGCGTTGAA GGGGTCGCTG CTTTTACCAT AATGCACTAT
CTTTTCTTTG CCGAGCAGAT TATTATTTAT GGTTTTTCAG ATGCTCTGCA GCCTATTATC
AGCACGAACT TCGGATCGAG AAAGCCTGAG CGGATCAAGG GATTTCTTGT GCTGGGGATG
ATTTGTGTGG GTTGTGTCGG GTTTTCTCTT GTGGCCCTGC TTCTTCTTAT TCCGGAACAG
CTTGCAGGCC TGTTTCTTGA TAATGGCACG GAAGAAACAA GAAGGCTTAC TCTTGCATTT
ATTTCTCTAA GCTGGCCTGC GTTTCTGTGG AACGGATTTA ATGTTCTGTT CAGTGCGTAC
TTTACCGCGA TTCACAAGCC GCTTCCTTCA GCGTTTGTCG CTTTTTCAAG AACGCTGGTT
TTTCCGCTTC TGTTTGTGAC TGTGCTACCT GTTTTTTTCG GTGATGCAGG GATTTTTGTT
TCGTTTTCTA TCGCAGAGTT CTTCACCTTT CTCTTTGTTC TCTATTTCTT CTCTCTCATG
CTGCCTCATA AGGTGGTTCA TGAAGCAGCA TAA
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| Protein sequence | MSRDRFTDML QGNIVAVFFY HAIPNVLGML AISSSGIVDG IFVGNYVGDS ALASINLIMP
VFSLLLGVAV MFSVGGMVRC GKYIGESNRD AANAVFSKTL ITVSLVTLSL AFSGLLFIDR
LVVMLGANEI LAPLVHEYLY ILLLFMFFLP VSLCLAFFVR VDGQPLLAAA AIISAAIVNI
FFDWLFVASW GMGLRGAALA TGLANITSFL VLMIHFFAKK SLLRFSWYQQ EWREMIHVAY
NGMSEFANQL SAAIVILVFN WIMIGRFGVE GVAAFTIMHY LFFAEQIIIY GFSDALQPII
STNFGSRKPE RIKGFLVLGM ICVGCVGFSL VALLLLIPEQ LAGLFLDNGT EETRRLTLAF
ISLSWPAFLW NGFNVLFSAY FTAIHKPLPS AFVAFSRTLV FPLLFVTVLP VFFGDAGIFV
SFSIAEFFTF LFVLYFFSLM LPHKVVHEAA
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