| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_1630 |
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| Symbol | |
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| ID | 6375311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 1757499 |
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| End bp | 1759073 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642684120 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001960031 |
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| Protein GI | 189500561 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00282322 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATTG TGGTTAACCT ATTTTTAATA GTTCTTGCAT CGCTTCTTTT TTTTGTCGTT
GGTTTTTTTA TCGGACGCTT TTTTCTTGAG AAAATCGGTA CGACAAAAGT TCTTGAGGCT
GAAGAGCGAG CCGTTCAGAT TGTTCAGGAG GCCCAGAAAG AGGCTAACGA GTACAAAGAC
CTGAAAGTTA CAGAGGTCAA TCAGGAGTGG AAGAAGCGCC GACGCGAATT CGATGCGGAT
GTGACGGTAA AGAACAACAA GTTCACTCAG TTACAGAAAC AGATTCGTCA GAAGGAAAAT
AACCTGAAAC GTCAGGGTCA GGATCTCAGG GATAGTGAGA AAAAAGTTGA GGCGACGCGT
AAAGAGCTCG AGCGGGAGCG GGAATCTTTA TCGAACAAAA TAAAGGAACT CGAACGGATA
ACGGCCGAAC AGAACGAGAA GCTCGAGGTA ATCAGTAATC TTCAGGCTGA AGATGCCAAG
CAGATGTTAA AAGATAATAT GGTTGCTGTC GCTCGCGAAG AAGCTACGGA AACCATTCAC
AGAATTCATG AAGAGTCTGA GCAGGAGGCT TCCAGAATAG CTGAAAAAAC ATTGCTTACA
GCTATCCAGC GTGTTTCTTT CGAGCAGGCT ACGGAAAGTG CCTTGTCAGT TGTTCACATT
CAAAGTGATG AGCTGAAAGG CAGGATTATC GGTCGTGAAG GACGCAACAT TAAAGCATTT
GAAAATGCGA CCGGAGTTGA TATCATCGTT GACGATACTC CTGAGGTTGT CATTCTCTCC
TGTTTTGACC CATTGCGCAG AGAGCTTGCC AAGCTGACGC TGCAAAAACT TCTGATAGAC
GGTGTTATTC ATCCGGTTGC AATCGAGAAG GCATACGAGG ATGCAAAGAA AGAGATCGAC
GATGTTCTCA TGAGCACTGG AGAGGAGACT CTTGCTTCTC TTCAGATTCC GGATATGCCG
GCAAAAGTTG TCGCTTTGAT AGGCAAAATG AAATATCATA CCGTCTACGG TCAGAATCTG
CTCCAGCATT CGAGAGAAGT CGCGATGCTT GCCGGTCTCA TGGCCGCTGA ACTCAAACTC
GACGCGAAAT ATGCCAAACG TGCAGGTCTG TTGCATGATA TAGGCCTGGT GCTTCCCGAG
AGTGACGAGC CTCATGCGAT TGCCGGTATG CAGTATATGA AGAAGTTCAG GGAGTCAAAA
GTAGTGCTCA ATGCGATTGC CGCGCATCAT GGCGACGCAC CAAAGGAAAG TCCCATAGCA
GATCTTGTAG AAGCAGCCAA CGTGATATCT TCAGCTCGTC CGGGTGGACG TGGAGCTGTT
ACTGCAGAGG GGCATGTGAA GCGGCTGGAA AACCTGGAAG AGATAGCAAA AGGATTTCCC
GGCGTGATCA AGACCTATGC GCTGCAGGCA GGAAGAGAGA TTCGCGTTAT TGTTGAAGGC
GAAAATGTGA ATGATTCACA GGCAGATATT CTCGCACATG ATATCGCACA CAAAATAGAA
GAGGTTGCTG ATTATCCGGG CCAGATCAAG GTGTCGATAA TCAGGGAAAA ACGATCGATC
GCTTACGCGA AGTGA
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| Protein sequence | MAIVVNLFLI VLASLLFFVV GFFIGRFFLE KIGTTKVLEA EERAVQIVQE AQKEANEYKD
LKVTEVNQEW KKRRREFDAD VTVKNNKFTQ LQKQIRQKEN NLKRQGQDLR DSEKKVEATR
KELERERESL SNKIKELERI TAEQNEKLEV ISNLQAEDAK QMLKDNMVAV AREEATETIH
RIHEESEQEA SRIAEKTLLT AIQRVSFEQA TESALSVVHI QSDELKGRII GREGRNIKAF
ENATGVDIIV DDTPEVVILS CFDPLRRELA KLTLQKLLID GVIHPVAIEK AYEDAKKEID
DVLMSTGEET LASLQIPDMP AKVVALIGKM KYHTVYGQNL LQHSREVAML AGLMAAELKL
DAKYAKRAGL LHDIGLVLPE SDEPHAIAGM QYMKKFRESK VVLNAIAAHH GDAPKESPIA
DLVEAANVIS SARPGGRGAV TAEGHVKRLE NLEEIAKGFP GVIKTYALQA GREIRVIVEG
ENVNDSQADI LAHDIAHKIE EVADYPGQIK VSIIREKRSI AYAK
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