Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1605 |
Symbol | |
ID | 6375283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1732071 |
End bp | 1732598 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642684093 |
Product | NADH (or F420H2) dehydrogenase, subunit C |
Protein accession | YP_001960007 |
Protein GI | 189500537 |
COG category | [C] Energy production and conversion |
COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGAAT CACAGGAAAG CGTATCGAGG TCACAAGAGG TTGAAGCTGC TCTTGCTCTT TGGGAGATAG TCCATGCGGC ATTTCCTGAT GCGGTATCGG CTTTGGATGA AAATCCGTTC ATGCCCTTTT TCGAGGTGCA GCAGACTGAA CGCTGGAGGG AAATCGCTCT GTTTTTACGG GACGACCCGA AACTGCGATG TAACTACATG GCCTGTCTGT CAGGAGTTGA TTACCCTGAA GAGGGTAAGC TCGGGATCGT TTGTAACCTT GAATCAGTAG GGGTGCATGC TCATAAAATA GCCGTTAAGG TTTACTGTGA CAGGGAGGAT GGTGTGATTC CTTCCGTGGC GAGGGTATGG AAAACAGCAG ACTGGCATGA GAGGGAGGCG TTTGATATGT ATGGAATGAC TTTCAGCGGC CATCCTGATC TGAGGCGAAT TCTCTGTCCT GAAGACTGGA CAGGTTATCC TCTGCGCAAG GATTACGTGG TGCAGGAGTC TTATCATGGA ATCAAGGTTC CGAATTGA
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Protein sequence | MGESQESVSR SQEVEAALAL WEIVHAAFPD AVSALDENPF MPFFEVQQTE RWREIALFLR DDPKLRCNYM ACLSGVDYPE EGKLGIVCNL ESVGVHAHKI AVKVYCDRED GVIPSVARVW KTADWHEREA FDMYGMTFSG HPDLRRILCP EDWTGYPLRK DYVVQESYHG IKVPN
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