Gene Cphamn1_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1505 
Symbol 
ID6375183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1626660 
End bp1627529 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID642683998 
ProductUbiA prenyltransferase 
Protein accessionYP_001959912 
Protein GI189500442 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGAATT ATTTCTTCAG AAATAAACTT CATCTCTCGT TTCTTTCAGC GCTCGGGGCT 
GCGAGCTGGT CAATATATTT CGATATCCCG GTTAATGTAT GGGCGGTCTT GACTGTTTTC
CTGCTAACAT TTTCAATATA CCAGGACAAC CGACTCACCG ATGATAAAGA AGACGCGGCA
AACGACCCCG AAGGTCTGAA AAACGCCCTG AAGAACAAAA CACTTATCAC CTACGTGATA
TTCTACCTGA TTTCCTTCAT TTCACTCCTG ATCTCCTTTC AATTCGGACA ATCTGCATTC
TGGATAACGG CGCTTATCAT CCTCATCGGA TTTCTGTATA ATCATAAATG CTTCCCCGCC
TTTCTCTCAA GGCTCTTGAA CGGCGCCCGG CGACTGAAAG ATATCTACAT CGTAAAAAAT
CTCACCCCTC CGCTCGACTG GGCGGCTGCG CTTGTCTTTC TCCCCCTGTT TTTCGAAGGA
GAGCCCCTTT CGCTCAAAGC GTGGATCTGC TGGGGATACG TGTTTATCTG CGCGTTTTTT
ATCGAGGTGA TGTGGGACAT GCGCGATCGA CGTGGCGACC TTTTGAGCGG CATCAAGACA
ATCGCCAACA CCTTCTCCTT TCCGCACACA AAAAAACTCC TCATCATCAC CAGCCTGATC
TCCGGACTCC TCCTTTTCTC CTTCACCATC ACGGAAATCC TTCCTGCATC CACCTATTTC
CTTTTGTCAA ATAATGTTGC CGTGATCGTC ATTGCTAGCA TGTACAAGGA GAACAAGGAA
GAGTCCATGC GAAAGATCAG CGACTCGACA ATACTTCTCG CCACCGTCCT TTTTCTCTCC
TTTGGCCTGA TCGCTTTTTA TACGAACTGA
 
Protein sequence
MPNYFFRNKL HLSFLSALGA ASWSIYFDIP VNVWAVLTVF LLTFSIYQDN RLTDDKEDAA 
NDPEGLKNAL KNKTLITYVI FYLISFISLL ISFQFGQSAF WITALIILIG FLYNHKCFPA
FLSRLLNGAR RLKDIYIVKN LTPPLDWAAA LVFLPLFFEG EPLSLKAWIC WGYVFICAFF
IEVMWDMRDR RGDLLSGIKT IANTFSFPHT KKLLIITSLI SGLLLFSFTI TEILPASTYF
LLSNNVAVIV IASMYKENKE ESMRKISDST ILLATVLFLS FGLIAFYTN