Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_1116 |
Symbol | |
ID | 6374791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1201642 |
End bp | 1202418 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642683618 |
Product | fatty acid hydroxylase |
Protein accession | YP_001959535 |
Protein GI | 189500065 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3000] Sterol desaturase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTATC TTCTGCCCCT CTCCTATATT ACCACCGTCA CCGGAGGTAT TCTGCTCTGG ATTCTTGAAG GAGTTATTCC TTTTTTCGCC AACAGAAAAG CCCGCGGTAC TCACGCCGCA GGAAATCTCT CGATCGCAGG CGTAAATCTT CTTATCCTCC TGCCGGCGGG AATACTGATG GCAGGAATAC TCGAACAGTC AAAATCCTTC TGGCCGGGTA TTCGATCACT TGATCTGCCG GTATTTGTCC AGACCATAGT GATCATTCTC CTCATAGACC TCTGGATGTA TAGCTGGCAC AGAATGAACC ATACCGTTGA TTTCCTCTGG AGATTCCACG CTGTTCATCA CAGTGACCCA TCGATGGATG TCACTACCGC CTGGCGGTTT CACTATGTGG AAATCCTCTT TTCCGAAATG CTTCGGCTCC CTGTTTTCAT ACTCATCGGT GCGGGTATAC AGGAGATTCT GATCTACTCG ATGCTGATGA CCCCCGTCAT CGAATTTCAC CACAGCAACA TCTCCATCTC CTCATCGACC GACAGGCTGC TGCGCACGGT CATACCCACC CCCATGATGC ATCGCGTGCA TCATTCCGTC GTCAGAGAAG AACATGACTC CAATTATGGC AGCATGCTCT CTTTCTGGGA CAGATTTTTC GGGAGCTTCA AAAGCAACAT TGATATCAGG AATCTGACTC TCGGCCTTCA GAACGAAAGT TCTCCAGAGC AGCAGCACCT TGCCGCATTG CTCAAAAGAC CGTTTCACAA CCTCTGA
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Protein sequence | MDYLLPLSYI TTVTGGILLW ILEGVIPFFA NRKARGTHAA GNLSIAGVNL LILLPAGILM AGILEQSKSF WPGIRSLDLP VFVQTIVIIL LIDLWMYSWH RMNHTVDFLW RFHAVHHSDP SMDVTTAWRF HYVEILFSEM LRLPVFILIG AGIQEILIYS MLMTPVIEFH HSNISISSST DRLLRTVIPT PMMHRVHHSV VREEHDSNYG SMLSFWDRFF GSFKSNIDIR NLTLGLQNES SPEQQHLAAL LKRPFHNL
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