Gene Cphamn1_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_1116 
Symbol 
ID6374791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp1201642 
End bp1202418 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content50% 
IMG OID642683618 
Productfatty acid hydroxylase 
Protein accessionYP_001959535 
Protein GI189500065 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTATC TTCTGCCCCT CTCCTATATT ACCACCGTCA CCGGAGGTAT TCTGCTCTGG 
ATTCTTGAAG GAGTTATTCC TTTTTTCGCC AACAGAAAAG CCCGCGGTAC TCACGCCGCA
GGAAATCTCT CGATCGCAGG CGTAAATCTT CTTATCCTCC TGCCGGCGGG AATACTGATG
GCAGGAATAC TCGAACAGTC AAAATCCTTC TGGCCGGGTA TTCGATCACT TGATCTGCCG
GTATTTGTCC AGACCATAGT GATCATTCTC CTCATAGACC TCTGGATGTA TAGCTGGCAC
AGAATGAACC ATACCGTTGA TTTCCTCTGG AGATTCCACG CTGTTCATCA CAGTGACCCA
TCGATGGATG TCACTACCGC CTGGCGGTTT CACTATGTGG AAATCCTCTT TTCCGAAATG
CTTCGGCTCC CTGTTTTCAT ACTCATCGGT GCGGGTATAC AGGAGATTCT GATCTACTCG
ATGCTGATGA CCCCCGTCAT CGAATTTCAC CACAGCAACA TCTCCATCTC CTCATCGACC
GACAGGCTGC TGCGCACGGT CATACCCACC CCCATGATGC ATCGCGTGCA TCATTCCGTC
GTCAGAGAAG AACATGACTC CAATTATGGC AGCATGCTCT CTTTCTGGGA CAGATTTTTC
GGGAGCTTCA AAAGCAACAT TGATATCAGG AATCTGACTC TCGGCCTTCA GAACGAAAGT
TCTCCAGAGC AGCAGCACCT TGCCGCATTG CTCAAAAGAC CGTTTCACAA CCTCTGA
 
Protein sequence
MDYLLPLSYI TTVTGGILLW ILEGVIPFFA NRKARGTHAA GNLSIAGVNL LILLPAGILM 
AGILEQSKSF WPGIRSLDLP VFVQTIVIIL LIDLWMYSWH RMNHTVDFLW RFHAVHHSDP
SMDVTTAWRF HYVEILFSEM LRLPVFILIG AGIQEILIYS MLMTPVIEFH HSNISISSST
DRLLRTVIPT PMMHRVHHSV VREEHDSNYG SMLSFWDRFF GSFKSNIDIR NLTLGLQNES
SPEQQHLAAL LKRPFHNL