Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0963 |
Symbol | |
ID | 6374630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 1037220 |
End bp | 1038548 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642683464 |
Product | MiaB-like tRNA modifying enzyme YliG |
Protein accession | YP_001959388 |
Protein GI | 189499918 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGAAA ACAGTCCTGA AACCATGACC AGAAACAGAT CGATTTTTCT TCTGAGCCTC GGCTGTTCAA AAAACACCGT CGATTCCGAA CGGCTCATCG GCCAGGCACG GCGTAAGGGG CTGAGCTTCA CCAACGAGCC GGACGAAGCC GATATCGTGA TCATCAACAC CTGCGGCTTC ATCGCCGACG CCAAGACGGA GTCGATAGAC GAAATCCTCG CCGCAGCTGA AAAGAGAAAA AACGGCGAGA TCGAGGCACT CTACGTCATG GGATGCCTGA GCGCTCTCTA CGCAGCCGAG CTCAGGGCTG AACTGCCCGA AGTCGACCGC TTCTTCGGCA CCGCCGACCT CCCGGAAATC CTCAATATTC TCGGAACAGC ATACGATCCG GCAACACGGT TCGAACGCTC ACTACTCAGC CCCTCGCATT ACGCATGGCT GAAACTCTCC GAAGGGTGCA GCCGCACCTG CTCCTTCTGC GCGATCCCAA AGATGCGCGG ACGCTACAAG AGCGAGAGCA TGGAAGACCT GCTTCAGGAA GCAACCAGGC TGAAAGCGAA AGGGGTGAAA GAACTCAACC TGATCGCACA GGATATCACC CCCTATGGCC TGGACCTCTA CGGAACGTCA CGCCTGAACG ACCTCATGAG GGAACTGTCG GATCTCAACT TCGACTGGAT CAGGCTGCTC TACGCCTACC CCCTCGACTT CCCTCTCGAG GTCATCGACA CAATGCGTGA ACGGGAAAAC ATCTGCGACT ACCTCGACAT GCCTGTCCAG CACATCTGCG ACCGCATCCT CGCATCGATG AAGCGGGGCA TCGACAAACA GGGCACCATC GGACTGCTGG AATCCATCCG GAAACGCAAC CCGAACATTC GCCTGCGCAC CACGATGATC GTCGGCTACC CCGGAGAAAC GAGAGCGGAG TTCGAAGAAC TCCTGCAATT CGTCAGGGAG TTCCGTTTCG ACCGCCTCGG CTGCTTCCCC TACAGCCACG AAGAGCATAC CGCCGCCTAC GACAACCTCG AGGACGACAT CCCGGAAGAA GAAAAACAGG AACGCGTAGG CGAACTGATG GAGCTGCAGG AAGGTATTTC CGAAAAAAAG AACCGGGCGC TCGAAGAAAA AGCACTGAAG GTGCTCGTCG AGGAGGTAGA AGACAACCTC GCCTTCGCCC GCACCGAATA CGACGCCCCC GAAGTGGATA ACGAGTGCGT CCTCGATACT GCCGGGATTG ATATCAGACC GGGTGATTTC TGTATGGCTA CGATTGAGGA GAGCTCGGCG TATGAACTGG TTGGAAGGAT TAAAAATGTT ATACCGTAA
|
Protein sequence | MPENSPETMT RNRSIFLLSL GCSKNTVDSE RLIGQARRKG LSFTNEPDEA DIVIINTCGF IADAKTESID EILAAAEKRK NGEIEALYVM GCLSALYAAE LRAELPEVDR FFGTADLPEI LNILGTAYDP ATRFERSLLS PSHYAWLKLS EGCSRTCSFC AIPKMRGRYK SESMEDLLQE ATRLKAKGVK ELNLIAQDIT PYGLDLYGTS RLNDLMRELS DLNFDWIRLL YAYPLDFPLE VIDTMREREN ICDYLDMPVQ HICDRILASM KRGIDKQGTI GLLESIRKRN PNIRLRTTMI VGYPGETRAE FEELLQFVRE FRFDRLGCFP YSHEEHTAAY DNLEDDIPEE EKQERVGELM ELQEGISEKK NRALEEKALK VLVEEVEDNL AFARTEYDAP EVDNECVLDT AGIDIRPGDF CMATIEESSA YELVGRIKNV IP
|
| |