| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0816 |
|---|
| Symbol | |
|---|
| ID | 6374483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 880304 |
|---|
| End bp | 881692 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642683324 |
|---|
| Product | beta-lactamase domain protein |
|---|
| Protein accession | YP_001959248 |
|---|
| Protein GI | 189499778 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTG AATTTTACGG AGCCACGTCA AGGATCACCG GTTCCTGTCA TATTCTGAGG
ATTGACGGTC GCCGGATTCT TCTTGATTGC GGTCTGGTGC AGGGCAGGGA GGAGGAGGAA
GCGCTGAACA GGGAGCCGTT TCCTTTCGAC CCCCGGGAAA TTGACGCGGT TGTGCTCAGC
CACGGGCATA TAGATCACTC GGGAAGGGTT CCGCTTCTTG TGAAAAAGGG GTTCGACGGT
CCGGTCTATA CGCATCCGGC GACAAGAGAC CTCGCCCTGG TGCTGCTGCA GGATTCAGCA
AGGTTGAACG AGCGGGATGT GCGCTACGAA AACCGGCTCA GAGAAAGGAA AAACATGCCT
CTCATCGAGC CTCTCTACAC TGTGGAGGAT GTCGTGAGGA CGGTAAATCT GATGCAGGGG
TTGAAGTACG GCGTGAAAAA AGAAATTCTT CCGGGAGTGA CGATACGTTT TCAGGATGCC
GGACATATTC TTGGTTCGGC ACTGGTAGAA CTCTGGCTTA CCGAAAAAGG CAGAACTGTA
AAACTGGTTT TCAGCGGAGA CATCGGTCAG TACGATTCAC CTATTTTGTA CGATCCGTCA
ACAATAGCCG AGGCGGATGC GGTTATTCTT GAAAGCACTT ACGGAGACAG GCTGCACCGG
GAGCGAGCGG AGACCCTGAA GGAAATTGCG GAAGTGATCC GTCTTGCTGA TCGTGAAGGC
GGCAACATTC TTGTTCCTGC ATTTTCCATC GGCAGAAGCC AGGAACTGCT CTATCTCTTC
GCGATCTACC ATAAGGAGTG GGGACTGGAC CGCTGGCAGA TTTTTCTTGA CAGTCCCATG
GCGATCGAGG CAAGCCGGAT CTACTGGGAG TACCCCGATT TGTATGATGA AGAAGCGACC
AGGCTTCGCG AGCAGGTGAA CGAGATGCCG ATGCCCATGA ACCTGCATTT TACCCGTGAT
GCGGCTGAAT CCAGAAAGAT CAATGACATA AGGCACGGAG CGATTATTAT TGCCGGAAGC
GGGATGTGCA ATGGAGGAAG GATACTCTAT CATCTCAAGC ACAACATCCG GCGTCCCGAG
TGCCATGTTC TCATTACCGG TTTTCAGGCG GAGGGAACAT TGGGTCGTGA GCTGGTAAAT
GGTTCCAAAA GCGTGCGTAT CCGCGGTGAG GAGTTCAGCG TGGATGCACC CGTGCATACA
ATCGGCGGTC TCTCCGCACA TGGTGACCAG CAGGACATGC TTCGGTGGCT GAAAGGCTTT
GACTCCTCTC CGCACGTCTA TGTGGTGCAT GGAGAGAACG GGGTCAAGGA GGTTTTCAGC
GCGTTGATTC AGGAGAAACT CGGTCTGGAG ACAAGCGTGC CGCAGGAGGG TGATCGTGCA
CTGCTTTGA
|
|---|
| Protein sequence | MELEFYGATS RITGSCHILR IDGRRILLDC GLVQGREEEE ALNREPFPFD PREIDAVVLS
HGHIDHSGRV PLLVKKGFDG PVYTHPATRD LALVLLQDSA RLNERDVRYE NRLRERKNMP
LIEPLYTVED VVRTVNLMQG LKYGVKKEIL PGVTIRFQDA GHILGSALVE LWLTEKGRTV
KLVFSGDIGQ YDSPILYDPS TIAEADAVIL ESTYGDRLHR ERAETLKEIA EVIRLADREG
GNILVPAFSI GRSQELLYLF AIYHKEWGLD RWQIFLDSPM AIEASRIYWE YPDLYDEEAT
RLREQVNEMP MPMNLHFTRD AAESRKINDI RHGAIIIAGS GMCNGGRILY HLKHNIRRPE
CHVLITGFQA EGTLGRELVN GSKSVRIRGE EFSVDAPVHT IGGLSAHGDQ QDMLRWLKGF
DSSPHVYVVH GENGVKEVFS ALIQEKLGLE TSVPQEGDRA LL
|
|---|
| |