Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0205 |
Symbol | |
ID | 6373860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 200511 |
End bp | 201440 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642682723 |
Product | hypothetical protein |
Protein accession | YP_001958659 |
Protein GI | 189499189 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.676053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0127531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAAGG GAATCACTAT ACTTGTGCGC ATACTGCTCC TGCTCATACT CTTTCAGGCA TACGACGCTC TTTCGGGACT GAACCATAAT ACAGCCTGCG CGGAGAAAAT GAAAATTATT TTACAGCAGG CCGACAGACT GCAGGGTGGC GAAAAGCGCT CACCGACAGG AAACATCGAA CCGGTTCGCT CCGTGTCGGG CAATGTTGTA TTTATTCATG AAAACATGCT GCTGAACTGT GACAAAGCCA CCGAGTTTCT CGAAAGCAGT ATCGTGGAGT TAGAGGGCAA TATTTTCATG ACCGATCGCG AACTGGAAAT CTATTGCGAC AAAGCCCTGT ACTACACAAA AACGGGCATC GCGAAACTGT CAGGAAATGT ACATGGCCGA CTGCTTGAAA ACAACCTGAC AGCACGCTCC AAACGGGCAC TCATCGACAA TCCCGGCAAT CAGCTCTGGC TTTTTGATGA TGCGGCCGCC TGGCAGGCTG AACGTCAACT CACCGGCGAC ACGATTCTCG TTCAACTCAA GGAGATTGGT GAGAAAAAGA AAGCTGAATC GGTAAAAATC AGCGGAAACG CCTTTTTTGC CGCCAGAGAT ACGCTCGATA CGACCAGACA GCTCTATAAC CAGATAAGCG GCAAAACCAT ATTCATCAAA CTCAGCGAAG AAGAGAAGGT AACCGGCATA GAGGTGGATT CCCAGGCAAG AAGCCTCTAT CACGCTTACG ATAATCAGGA GTCACCCGCC GGAGTGAATT ATTCAAGCGG CAACACGATC CTCATGTCAT TCCGGGAGGG AGCGCTCAAC AGAATAGCGG TTAACGGCAA TGTAGAAGGC AAACAGTACC CGAACAAGCT GAGGGGCAGT TCATCGATCA ACCTTCCAGG CTTCAGACTG CGCTATAATG ACAGGCCGGA ATTCAGGTAG
|
Protein sequence | MMKGITILVR ILLLLILFQA YDALSGLNHN TACAEKMKII LQQADRLQGG EKRSPTGNIE PVRSVSGNVV FIHENMLLNC DKATEFLESS IVELEGNIFM TDRELEIYCD KALYYTKTGI AKLSGNVHGR LLENNLTARS KRALIDNPGN QLWLFDDAAA WQAERQLTGD TILVQLKEIG EKKKAESVKI SGNAFFAARD TLDTTRQLYN QISGKTIFIK LSEEEKVTGI EVDSQARSLY HAYDNQESPA GVNYSSGNTI LMSFREGALN RIAVNGNVEG KQYPNKLRGS SSINLPGFRL RYNDRPEFR
|
| |