Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0134 |
Symbol | |
ID | 6373783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 130851 |
End bp | 132374 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642682652 |
Product | Integrase catalytic region |
Protein accession | YP_001958594 |
Protein GI | 189499124 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.53025 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCCA TCAGAGAAAT CGCCCGGCTC CATCTTGACA AGGAGCTCAG CATGCGAGCC ATCGCAGCTT CCTGCAAACA GTCGGTCTCG ACAGTGCAGG GCTATGTAAA GAAAATCGAG GCCGTAGGCC TTGACTACAG CTCGCTTGCC TCGTTGTCAG ACTCGGAACT GCAGGAACGG CTACGGCCTG CAGGAAAAAC CTGCAAGGCT TCCCGTCCCG AGCCGGACAT CGCCCGGCTC ATCGCCGAGA TCAAGAAATC CAAAGGGAAG GTGACCCGTC AGTTCCTGCA TGAAGAGTAC CTTGCCCAAT ACCCTGACGG TTACAAAAAG ACTCGCTTTT ACGAGCTGCT CCGAGAGTGG GAGGCGCAGG ACAAGGCCAC TATGCGCATG ACGCATACCC CGGGAGAGAA GATGTTCATC GACTTCTCCG GTGACAAGCC AAGCTGGATC GACCCGACAA CCGGCGAGGT GTTCCAACCC GAACTGTATG TGGCGGTCCT TGGCGGCAGC TCCTATACCT TCGCCTGCGC AGTCCCGAGC CAGAAGGCTG AGGACTTTGC CATGGCAACC GTCAAGGCAC TCGAATTCTT TGGCGGATGT CCTCAGATAC TGGTCATCGA TAATCTCAAA AGTGGTGTGA CCCATGCTTG CTATTACGAT CCGGACATCA ACCCCACGTT TGCCGACCTT GCTCGCCACT ACTCGGTAGC GGTGCTGCCT GCCCGGGTGC GCAAACCCAA AGATAAAGGT AAGGTCGAGA GTGGCGTGCT GCAGGTACAG CGCCGTATCC TGGCACCGCT CAGGAACCGC CAGTTCTTTA GTCTCGAGGA ACTCAACGGG GCTATAGCTG ACGAGCTTGA AAAGCTCAAT AACCGTCCGA TGCGCCAGTA CGGCAAGAGC CGCCGGGAGC TGTTCATGGA ACTCGAGAAA CACCGGCTTG CCTCACTGCC GCAGACACGC TTCAGCATCG GCTACTGGAG CAAGGCAAAG GTGCATATCG ACTACCATGT CAGTGTCGAT AAAAGCTTCT ATAGCGTGCC CTATACCCTG ATCGGCAAGC CGGTCGATAT CAAGCGCACC GCCCATCAGG TAACCGTCTA TCATGATGGT GAAGTTGTTG CCCGCCATAT CCGGACACTC AAACGGGGCC AGTATATCAC CGATCCACAC CATATGCCGT ATGAACACCG GTTTTACAAG GAATGGAGCC CGGAGCGCAT ACGCTCGTGG GGGGCCAAAA TAGGCCCGAA CACGGCACGT CTGCTTGAGC GGATCATGCA GCAACGCCGC ACCCCGGAGC ATGGCTTCAG GAGCTGTCTC GGTATCCTCC GGCTGGCAAG GATGTTCACC CCTGAACGGC TTGAGCGAGC ATCGCGCAAA GCACTCGAAC AGAACATGAC AACCTACAAG AGCATCAAGT CGATGCTCGA CAACGGCCTG GATGCCGTGA CCCTGTTCGA GGAGCAGGAG CCTTCACCGA CCATCTCCCA TCAGAACATC AGGGGAGGTG GATACTATGC TTGA
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Protein sequence | MKAIREIARL HLDKELSMRA IAASCKQSVS TVQGYVKKIE AVGLDYSSLA SLSDSELQER LRPAGKTCKA SRPEPDIARL IAEIKKSKGK VTRQFLHEEY LAQYPDGYKK TRFYELLREW EAQDKATMRM THTPGEKMFI DFSGDKPSWI DPTTGEVFQP ELYVAVLGGS SYTFACAVPS QKAEDFAMAT VKALEFFGGC PQILVIDNLK SGVTHACYYD PDINPTFADL ARHYSVAVLP ARVRKPKDKG KVESGVLQVQ RRILAPLRNR QFFSLEELNG AIADELEKLN NRPMRQYGKS RRELFMELEK HRLASLPQTR FSIGYWSKAK VHIDYHVSVD KSFYSVPYTL IGKPVDIKRT AHQVTVYHDG EVVARHIRTL KRGQYITDPH HMPYEHRFYK EWSPERIRSW GAKIGPNTAR LLERIMQQRR TPEHGFRSCL GILRLARMFT PERLERASRK ALEQNMTTYK SIKSMLDNGL DAVTLFEEQE PSPTISHQNI RGGGYYA
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