Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0043 |
Symbol | |
ID | 6373686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 46330 |
End bp | 47856 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682565 |
Product | transposase IS4 family protein |
Protein accession | YP_001958513 |
Protein GI | 189499043 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5421] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGGG ACTTGAAAAT CAGAAAGGTG CGAACTGCAT CCGGAGCAAC TGCCGTACAA GTAGTCCAGA ATAAAGGGAC GGGGCGTTCT TTCCTCAAAC ATATTGGCAG TGCTCATGAT GAGCACGAGC TGGAATTGTT GCTGGATGAG GCAAGAAAAT TCGTCGAAGC TCATTGTCGC CAACCAAGCC TTTTTTCGGA TACTGATACG CCGTCTACAC CATCGCTGTT TAAGACTGTT CTTGACAAGT CAAGCGCTGT TGGCGTCACT CATCAGTTTG CCCGCAATGC GCTCCTTGCC TGTGCCCGAA AATGTGGCCT GGGCTCGTTG CCGGAGCTGT ATCTTGATCT GGCACTCATG CGCATCATTG AGCCAACATC GAAGTTGCGT TCGCTGGATC TTCTTGAGTC GTATTTCCAT GTCAGCTATG CGAAACGAAC ACTCTATCGC CTGTTCCCCA AGCTCTTGGG GTATCAGGAG GAGATCGAAA CCGCAGCCAT CCAAACCGCT CGAAGAGAAT TGCAGGAGCA GTTCAGTCTG GTACTGTACG ATGTTACCAC GCTGTACTTC GAGTCCTTCA AGGAGTACGA TTTCCAGCGT CCCGGATTCT CAAAGGACAA CAAACCCCAG CAGCCGCAAA TCGTCATTGG CTTGATCACC ACCCGCTCAG ATTTTCCTGT CATGCATGAG GCGTTTGAAG GCAACACCTT CGAAGGGAAA ACAATGCTCA AGGTCATTCA CCGCTTTCAG GAGCGTGTTG GCGAAACCAA GCCGATTATT GTGGCCGATG CCGGCATGCT CTCGAAAGAC AACATCCTGA AACTGGAGAA TGAAGGATAC CGCTACATCG TAGGGGCTCG GATGGCGAGT ACTGCGGTGA GCTTCATTGA TCAGGTTTAC AAAGCACTAC CTCGTACCGA TAAGGCTCTA CACCGCTTCA GCTACAAGTC TGCCGTAAAG AATGCCACCA TGATCTGTGA GTTCTCGGAG TCCCGATACA AAAAAGACAA GCGAGAGTTC GATAAGCAGG TCAAGCGGGC ACTTACCTTG CTTGAAAAAG ATGAACCCGG CCGACGGGCA AAATTCGTCA AGAAAACCAA AACAACCGAC AAGCCCTATA TCTTCGATAC CAATCTTCAG GCAAAGGCAG AGAAGCTTCT TGGCATCAAA GGCTATGTGA CCAATATCCC TGAGAAGGAA CTGTCCAGTC GTGCGGTTAT CGACTACTAT CATGATCTCT GGAACGTAGA GCAGGCTTTT CGCATGAGCA AATCCGACCT ACAGGCCAGA CCGATCTTTC ATCACACGGA AGATGCCATT AGGGCTCATA TGCTCGTCTG CTTTATGGCC TTGATGATGG GCAAACTTCT CGAAATAAAA ATGGGTCGAT CGTTACGCCA GATTCGGGAA AAAATCTGGG CGGTTCATGA AATCCATCTT TGCTATGAGC GAACCGGTGA GGTTTGTGTC ATGCAGATGG GCACAAGCGA ATTTACCAAC AAGATTCAAC GATTTCTTGA GCTCTGA
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Protein sequence | MRGDLKIRKV RTASGATAVQ VVQNKGTGRS FLKHIGSAHD EHELELLLDE ARKFVEAHCR QPSLFSDTDT PSTPSLFKTV LDKSSAVGVT HQFARNALLA CARKCGLGSL PELYLDLALM RIIEPTSKLR SLDLLESYFH VSYAKRTLYR LFPKLLGYQE EIETAAIQTA RRELQEQFSL VLYDVTTLYF ESFKEYDFQR PGFSKDNKPQ QPQIVIGLIT TRSDFPVMHE AFEGNTFEGK TMLKVIHRFQ ERVGETKPII VADAGMLSKD NILKLENEGY RYIVGARMAS TAVSFIDQVY KALPRTDKAL HRFSYKSAVK NATMICEFSE SRYKKDKREF DKQVKRALTL LEKDEPGRRA KFVKKTKTTD KPYIFDTNLQ AKAEKLLGIK GYVTNIPEKE LSSRAVIDYY HDLWNVEQAF RMSKSDLQAR PIFHHTEDAI RAHMLVCFMA LMMGKLLEIK MGRSLRQIRE KIWAVHEIHL CYERTGEVCV MQMGTSEFTN KIQRFLEL
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