Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0018 |
Symbol | rnhB |
ID | 6373660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 21575 |
End bp | 22198 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642682539 |
Product | ribonuclease HII |
Protein accession | YP_001958488 |
Protein GI | 189499018 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000987865 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTACTGT CAACCGAAGA CTATGAGGAA AAATTCTGGC ATGAACACAC ATGCGTCTGC GGCATAGACG AGGCGGGCAG GGGACCTCTT GCCGGCCCGG TCGTGGCCGC CGCGGTTATG TTCCCCCGCT ATTTCAAGCC AGAAGGCGTG CTGACCGGAC TGAACGATTC CAAAACTCTC CGTCCGAAAC AGCGATCGGC ATTGGCTGAA GCGATACAAA GCGCGGCTGA ATGCTTCAGC ATATCGATTA TAGACCATAC CACTATCGAC AGTGTGAACA TTTTCAACGC AACCATGCTC GCGATGAACG CTGCAGCAGA AAAGCTCGAG CAACTGCCTG GTCTTTTGCT GATTGACGGA AACCGTTTTG TCCCGAGCCT TCCCATCCCT TACCTGACCA TTGTCAAAGG AGACACAAAG GTAGTTTCCA TCGCGGCAGC CTCCATTCTT GCCAAGACCT GTCGCGACAG AATAATGAAT GAATACCACC GGGAATATCC TGAATACGGC TTTGCACAAC ATTTTGGCTA CCCGACACAA GCGCATATAG CAGCCATTGC CCGATACGGG CGCTGTCCCA TTCACAGAAC AAGCTTCAGG GTAAAACAAC TCGGCGAAAA GTAA
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Protein sequence | MLLSTEDYEE KFWHEHTCVC GIDEAGRGPL AGPVVAAAVM FPRYFKPEGV LTGLNDSKTL RPKQRSALAE AIQSAAECFS ISIIDHTTID SVNIFNATML AMNAAAEKLE QLPGLLLIDG NRFVPSLPIP YLTIVKGDTK VVSIAAASIL AKTCRDRIMN EYHREYPEYG FAQHFGYPTQ AHIAAIARYG RCPIHRTSFR VKQLGEK
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