Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_2740 |
Symbol | |
ID | 4569984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 3130694 |
End bp | 3132433 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639767308 |
Product | protein translocase subunit yidC |
Protein accession | YP_913148 |
Protein GI | 119358504 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGAA ATTCGGTGAC GGGTCTTGCT CTGATAGCTA TGATCATGAT TGTCTGGCTG CAGTTTATGT CCCCTGAAAA TAAACCGAAG CTCCGGACGG AGCCGGTAAA AAAAGAGCTT GCAACCAGTG CCGCGGTAAC GCCCGGAGCT CCCGCAGCGC CCGTCGGAGA CAATCTCGGG ATATTCGCAA CGGCATCAGC CGGTGCCGAG CAGTTGCAAA CGGTTGAAAA CGATCTCTTT AAAGTCACGC TTTCCTCGAA AGGAGCGACG ATAAAATCGG TAGTACTCAA ACAGCATCTT GACGGTCATC TCAAACAGTT CAATCTTGTC AGCACCCCTG ATAAAGGCGC GCTTTCACTT CTTTTTCTGA GCAACGACGG AAAAAAGATC GATACAAGAG ATCTTTATTT CAGAAGCGTC TCTCTTGACA CGCTCAAAAC GCTCAGCGGA ACCGAGCGCT ATGTTATCCG CTATGTGCTT GACGTTACCC CGGAAAAGGC TATTGCCATC ACCTATGGGT TCTCCGGCAA CAGCTACAGA ATCGATTATG ATGTCAAGCT CACAGGGTTC AACAACGCGC TTGTCGGCAA TGAGTACCAG GTGCAGTGGG ACGGAGGTCT GGTCTATTCC GAGAAAAACC GGGAGGATGA GTCGCATAAC GCGCTGGCGG GGTCCTATCT CGGAGGCAGT TTTGTGAAAC TTGACGCAAG CAAGGATAAA GAGAGCTATC GTGAAGAGCA ATCCGGACTT GCCAAATGGG TCGCCCTGAG AAACAAGTAT TTTGTTGCGG CGATCATCCC TCGGGGAGCA ACGGAAGGCA TATTTCTCGA AGGCCGCAAA ACGGCAGCTA CGCATTTTGA AGACTATCTT GCGGCGCTTA AAATGAGCGT CTCGGCAACA GAGCCGGTCA GCAGCAACAG CTACAGTCTC TATGTCGGCC CGCTTGACTA CAACACGGTC AAATCACTTG GAGTCGATCT TGAAAAGATC ATGGACTTTG GATGGGACTG GCTCACCAGA CCGTTCGCCG AGTATATCAT TCTTCCTGCC TTTACCTGGA TGAACAGGTT TGTAAGCAAT TACGGTCTGA TTATTATCAT TTTTGCCCTG CTCATCAAAC TGGTGACCTA TCCGCTCTCG ATGGCATCGA CAAAGTCGAT GAAAAAAATG TCGGCATTGC AGCCGGCTCT CAAGGAACTC CAGGAGAAAT ACAAGGATAA TCCCGCAAAG CTTCAGAGCG AATTGGGAAG GATTTACAAG GAAGCCGGAG TCAACCCGCT TGGCGGATGT TTGCCGGTCG TCTTGCAGAT GCCGCTTCTT TTTGCCATGT TCTATGTTTT CCGTTCATCG ATTCAGCTTC GTCATCACGG TTTTCTCTGG GCAAAAGATC TTTCGGTGCC CGATTCAATA CTCGATTTCG GTTTCGCCAT TCCCATGTAC GGAGACCATA TCGCAGTATT TCCCATTCTT ATGGCGATCA CTGTTTTTGT GCAGCAGAAA ATCACTCCTA CGGCACAGAG CAATGAGCAG ATGAAGATCA TGATGTACAT GTTCCCGGCC ATGATGCTCC TGTTTTTCAA CAATCTTCCT GCAGGCCTCG GGCTCTACTA CCTGATGTTC AATATTTTCA GCGTAGCCCA GCAGTTTTAT ATCAATGCTA CGACCACCGC GGATGACATG CCGAATGTCA ATCTCGGTAC TTCATCATCG AAAAAGAAAA AAGCAGGGCC TAAAAAGTAA
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Protein sequence | MDRNSVTGLA LIAMIMIVWL QFMSPENKPK LRTEPVKKEL ATSAAVTPGA PAAPVGDNLG IFATASAGAE QLQTVENDLF KVTLSSKGAT IKSVVLKQHL DGHLKQFNLV STPDKGALSL LFLSNDGKKI DTRDLYFRSV SLDTLKTLSG TERYVIRYVL DVTPEKAIAI TYGFSGNSYR IDYDVKLTGF NNALVGNEYQ VQWDGGLVYS EKNREDESHN ALAGSYLGGS FVKLDASKDK ESYREEQSGL AKWVALRNKY FVAAIIPRGA TEGIFLEGRK TAATHFEDYL AALKMSVSAT EPVSSNSYSL YVGPLDYNTV KSLGVDLEKI MDFGWDWLTR PFAEYIILPA FTWMNRFVSN YGLIIIIFAL LIKLVTYPLS MASTKSMKKM SALQPALKEL QEKYKDNPAK LQSELGRIYK EAGVNPLGGC LPVVLQMPLL FAMFYVFRSS IQLRHHGFLW AKDLSVPDSI LDFGFAIPMY GDHIAVFPIL MAITVFVQQK ITPTAQSNEQ MKIMMYMFPA MMLLFFNNLP AGLGLYYLMF NIFSVAQQFY INATTTADDM PNVNLGTSSS KKKKAGPKK
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