| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1833 |
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| Symbol | |
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| ID | 4571175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 2090479 |
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| End bp | 2092161 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639766415 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_912273 |
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| Protein GI | 119357629 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TTGCTGATAT AACGGTGCTT TTTGTTGATG ATGAGGCTGA TATTCTCAGC
TCATTAAACA GGTTTCTGCG CAGGGAGCCC TATAAAAAAC TGTTTGCCGA AAACGGAAAG
AAAGCTCTTT CGCTGCTCGA AGAACATGCT GTCGCTCTTG TTGTTACGGA TCTTCGCATG
CCGGAAATGA ACGGTCTGGA ACTGATCAGT GCGGTCAAGG AGAGAAATCC TGATGTTATC
CGTCTGATAT TGAGCGGATC GCAGGATTTT GATCAGATTA TCGAATCCAT CAATAAAGGC
GAAGTATTCC GTTTTATCCC CAAGCCTGTG GACCCTGATG CGTTCAGAAA AGTGCTGAAT
GATGCCATCG ACTATTATTG TCTTAAAACA GAACGCGAAG AGCTGTTTAA TGAGCTGTCG
ATAAAAAACA GGGAGTTGAC CAGGGCCAAT GATGCACTCC GTGTTATGGC CGGAGATCTG
CAGAGGAGTG AGGAAAAGTT CCGCTCAATG ACCGATGCCG CACATGACGC TGTTTTCATG
CTTAACAATG AAGGGAAAAT CGTTTATCGA AATACTGCGG CTGAAACGCT TTTTGGATTC
AGCAGGGAAG AGTATGGTGA TCAGCTTTTT TGGGAGCTGA TCTCACCTGA ATTTGCGGAT
TTCAATATTC ATGATGTTTG CGAAATGATG CCGGACGAAG CTCTGCCTGA TTTTAACAGT
GAAACAAGGG TTCGTCAAAT CGAGGGTCTG AGAAAAGACG GCTCTCTGGT TCCGATTGAA
ATATCGAGAG GGTGTGTTCA TATCGAGTCC GTTCATCATA CGGTAGTTAT TGCCAGGGAT
ATCACAGCGC GCGTTGAGGC GGAGCGGAGC CGGGAGCGTT ATGACAGCAT GCAGAAAGAG
CTTGAATCCG AGATTGAAAG AAAACTGCTG CAAAGCCCCG TTCCCGAAAC CCTTCAGGGG
GTTTCAATCA GTCGCCTGAT GATTCCTTCG GGTCATCTTG ATGGAGATTT TACGGATTTT
ATTGTCTACA ACAGCAGCCA TGCCGACATA ATTATTGGTG ACGTCATGGG TCATGGCATT
CAGTCGGCTC TGGTTGGCGC CGGTATAAAA GCACTGTTTC TCAAGGCGAT TGCACAAAAA
AAGTGTCTGT ATGGCGAACT CCCCGATCTG ACGGGAGTCG TGAGCAGCGT TCATGATCTC
TGCATTCATG AGCTCATGGC ACTCGGCACC TTTGCAACCC TTCTTTTCCT TCGTCTTGAC
CTTGAGGCGG GAGAGCTCTT TCTGATCGAC TGCGGTCACC CTCCGGTTCT TCACTTTAAG
GACGCAACGG GAACCATTTC GATGCTCAAA GGCGAACAGT TGCCGATCGG CATGATAGAG
AGGCAGGATT ACCATACCGT TTCAGCTTCG ATCAGCGAGA ACGATCTGCT TGTTCTCTAT
TCCGACGGTA TTACCGAGAG TTTTTCGCCG GACGGGAGAA TGTTCGGCAC AGAACGACTG
GTTGAACTGG TTATCAACTA TCACGACCTG CCTGCGGAAG ATCTGATTGA ACACATCAAG
GAGGGCGTTT CCTCTTTTGC CGGACGAGAT ACTTTTGATG ATGATGTGAC CTGTATCGTT
ATCCGTATCG GCACGTCGAC TTATAAAACT GTTGCTGCGG GTAATCCTGG CGGCACACCG
TAA
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| Protein sequence | MKNIADITVL FVDDEADILS SLNRFLRREP YKKLFAENGK KALSLLEEHA VALVVTDLRM
PEMNGLELIS AVKERNPDVI RLILSGSQDF DQIIESINKG EVFRFIPKPV DPDAFRKVLN
DAIDYYCLKT EREELFNELS IKNRELTRAN DALRVMAGDL QRSEEKFRSM TDAAHDAVFM
LNNEGKIVYR NTAAETLFGF SREEYGDQLF WELISPEFAD FNIHDVCEMM PDEALPDFNS
ETRVRQIEGL RKDGSLVPIE ISRGCVHIES VHHTVVIARD ITARVEAERS RERYDSMQKE
LESEIERKLL QSPVPETLQG VSISRLMIPS GHLDGDFTDF IVYNSSHADI IIGDVMGHGI
QSALVGAGIK ALFLKAIAQK KCLYGELPDL TGVVSSVHDL CIHELMALGT FATLLFLRLD
LEAGELFLID CGHPPVLHFK DATGTISMLK GEQLPIGMIE RQDYHTVSAS ISENDLLVLY
SDGITESFSP DGRMFGTERL VELVINYHDL PAEDLIEHIK EGVSSFAGRD TFDDDVTCIV
IRIGTSTYKT VAAGNPGGTP
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