Gene Cpha266_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0842 
Symbol 
ID4570379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp962365 
End bp964149 
Gene Length1785 bp 
Protein Length594 aa 
Translation table11 
GC content51% 
IMG OID639765440 
ProductABC transporter related 
Protein accessionYP_911317 
Protein GI119356673 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAATA TTTTCAGACT TGCCTATCTT CTCAAACCCT ATCTGAAACA GTCAATCGGC 
GCACTGTTGC TTTTAAGCGC AGTTGTAGCG ATGGATCTCG CAATTCCCCG TCTTATCCAG
AAAATCATTG ATCAGGGCAT ACATCAGCGA AACCAGGATG TTGTTATCTC TACCGGTCTC
CTCATGCTCG GCATTTCACT CTTAAGCGTT CTCTTTGCCA TCGGAAACAA TACCCTCTCA
GTCAAAGTAG GCGAAAGTGT TGCCAGGGAC CTCCGCGAAG CGATGTTTCT GAAAATCCAG
TCTTTTTCAT TCGGCAACAT CGACCGACTG AAAACAGGCC AACTGATGGT TCGCCTTTCA
AGCGATACAT CCGCCATACA GCGTGTCGTC CAGGTATCGC TGCGTATCGG CACACGCTCG
CCGTTACTGA TGATCGGAAG TCTGATTCTG ATGGTGAAAA CCAGCAGTAC TCTGGCCCTG
ACCATGCTGC CGATACTCCT GATAACCACT GCGATCATCG TTTTTTTTGT CATGAAAATG
GAGCCCCTCT TCCAGGCCGT ACGACAAAAG CTTGACCGGC TTAACATTGT GTTGCAGGAA
AATATTGCCG GTATTCGACT GATCAAGGCT TTTGTCAGGG CTGATTTTGA ATGCGGCCGC
TTTGAAAAGG CAAACACAGG TTTTACCGGC GACTCAATTC GTGTTATGAG AATGATGGCA
AGTATGCCCC CGATACTGAC ACTCTGCCTT AATGCGGGAA TGGTTCTGGT GATCCGCTCC
GGCGGGCTTG ATGCCATACG CGGAACCATG ACGATCGGAG AGGTCGTGGC ATTCACGAAC
TACCTGCTCA CAACCATGGC GCCACTGATC TTTATGGCCA TGATCTCGAA CGTCTGGGCA
AGCGGCATCG CATCGGCAAA CCGTGTTATG GAAGTGCTCG ACATTCTCCC CGACATACAG
GATAACCCTG AACCGACAGC AATGCCAGAG CATGCTCCCG GACACATTGC CTTTGAGCGT
GTCTCTTTTC GCTACAACAA CGCAAGCGAA GCCTCTGTTC TCGATGACAT CAGTTTTATT
GCCGAACCGG AAAAAACGCT TGCCATACTC GGCGCAACGG GTGCGGGAAA ATCAACGCTT
GTAAATCTCA TCCCCCGGTT TTACGATGTT TCATCGGGCA GAATCCTGAT TGACGGTATC
GATATAAGAG CGCTTGCCGA AAAGTCCCTC CTTTCGAAAG TAGCCATTGT TCCCCAGGAA
ACCGTGCTGT TTTCGGGAAG CGTTTTCGAC AACATTCGCT ATGGAGTGCC CGAAGCCGAT
AAAAAACAGG TCATCGAGGC CGCAAAAGCC GCCGAGGCTC ACGATTTTAT TCTCAACCTG
CCAAAAGGAT ACGATACCCG CGTTGAAGAG CGCGGCGTGA ACCTTTCCGG CGGCCAGAAA
CAGCGTATTG CTCTTGCACG GGCGCTGCTC TCATCCCCGA AAATCCTCAT TCTTGACGAC
AGTACGAGCG CCGTTGACAT TGAAACGGAA ACCAGAATTC AGAATGCGCT CCATCTGAAA
CACAGAAGAT GCACCACGAT CATTGTTGCC CAGCGCGTCA GCACAGTGCT GAAGGCCGAC
AAGATCATTG TACTTGAAAA AGGACGGATT GCCGGTGAGG GTGACCACGC CAGGCTGATG
CAGACATCGA CGGTCTATCG CGAAATCTGC GACTCACAGC TGGGAAGCGA AACACTCCCT
GAAAGCCCCG GCGGCACCAG CAAAAAGCAG GAGAAACAGC CATGA
 
Protein sequence
MTNIFRLAYL LKPYLKQSIG ALLLLSAVVA MDLAIPRLIQ KIIDQGIHQR NQDVVISTGL 
LMLGISLLSV LFAIGNNTLS VKVGESVARD LREAMFLKIQ SFSFGNIDRL KTGQLMVRLS
SDTSAIQRVV QVSLRIGTRS PLLMIGSLIL MVKTSSTLAL TMLPILLITT AIIVFFVMKM
EPLFQAVRQK LDRLNIVLQE NIAGIRLIKA FVRADFECGR FEKANTGFTG DSIRVMRMMA
SMPPILTLCL NAGMVLVIRS GGLDAIRGTM TIGEVVAFTN YLLTTMAPLI FMAMISNVWA
SGIASANRVM EVLDILPDIQ DNPEPTAMPE HAPGHIAFER VSFRYNNASE ASVLDDISFI
AEPEKTLAIL GATGAGKSTL VNLIPRFYDV SSGRILIDGI DIRALAEKSL LSKVAIVPQE
TVLFSGSVFD NIRYGVPEAD KKQVIEAAKA AEAHDFILNL PKGYDTRVEE RGVNLSGGQK
QRIALARALL SSPKILILDD STSAVDIETE TRIQNALHLK HRRCTTIIVA QRVSTVLKAD
KIIVLEKGRI AGEGDHARLM QTSTVYREIC DSQLGSETLP ESPGGTSKKQ EKQP