Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0533 |
Symbol | |
ID | 4569070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 585881 |
End bp | 588112 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639765132 |
Product | surface antigen (D15) |
Protein accession | YP_911014 |
Protein GI | 119356370 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.885553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTATTTT TTAAAATTGT CTTCCGGGTA ATACTGCAGT GTCTGGCACT GTCACTTTTT TGTGGAATAG CGCTTCCTGC TGCGGCCAAA AGTAAAATGG CGGACACGAC AGAAGCGCTG CCAGCCTCTA TGTACGTCAA TAAAATCCGG TTCAGCGGAA ACAAAGCCGT ATCGAGTGAT GAGTTGCTCC AGATCATCAC GACCTCTCCC CACTCTTCTT TTCTTGGACT TGGCCTTTTT GGCGGACCCA AAAAGCCATT CATTGCGGAG GAGTTCAAAA AAGACCTCTC TCTCATAAAA AAGCTCTATA CCTACAAGGG ATATTTTTTT ACCGAAATTG CATCATCAAT ATCTCCCCGT AACAACGGAA AAAAAATTGA TATCGCAATT AACATCCGGG AAAACGAGCC GTCACGAATC GACTCCCTCG CATATGATGG TCTGGAATCA ATTACCGATG ACCTGAGAAC AGCGTATCTG CAAAAGAGTG TCATAAAGAC AAATACCATA TTTTCCGTTG AGCGGTTGAT TAAGGAAAGA GATCGTACCA TGGATTTCTT TCGTGAAGAG GGATATGCAT TTTTCCATGA GGACAGTATT CGCATAAAAG TTGATACTGT CGGGACGCAG GCCGGGGTAT TGTTCAAGCT CAGGCTTCCC GAAAAACTCA CCTATGGCGG CGTTCAGGCT GTCGTACAAA ACCCATTCAG AAGCGATACC ACTGGTAGTA AAACCACTTT TCTACAAGAC AGTGTCACCG TTGTCATTTA CGGCAGGCAG AACATTAATC CTGCACTTTT ATCAAAACTG ACGACAATGC GTCCAGGCCG CTTGACAAAG GATAGTCGCG AAAAGGAAAC CCTGCAAAAT TTAGGCGCCA CCAATGTTTT TTCTTCCATC TCCATCAAGC CGGACTCTGT CAGATCAGGA AAGCTCTATA CCTCGATTAA TCTCGAACCC GCGCCAAAAC ACCAGATAGA ACCAAAGCTC CTTATCGACA ACCGTTATGG CTCCCTGTTT TTCGGAGGCG CCCTTACCTA TGAAAACAGA AACCTGTTTG GTGGAGCAGA ACAGTTCAAA GCCGCCACAG AGTTTGGAAC GCAGGCAGGA TACAGCAAAA CGTTCCTTTC TGATCTCAGT GAAGACCAGT ACGAAAAAGT CGTCCCTTTT GAATTCAGCC TGAAAAGCAG TCTGATCATG CCGGTCATCA CCAAACCGGG AAACAGCTAC TCCGCCTATG TGGAATATTC CGCAGCAAAA CTCCCGATAC TACTTTCGAC GCAAATCGGC CTGATTCGTG GTACGTACAG TGCAAAAACA GGCAATGCAT CGCGAATCAA TTTTGATTTT TTTGATTTCG AATGGGTCAA GAAAGACTCA CTCAAAGGAT TCAGACAACT CTTTAAAAAT GATCTTGCCA GCAATATAGG CATCGATCCG ACTGATGACG CAGCCGTCAA CGCAGGCATA GACAGTCTTC TTGATGCACG TGTAAACCAG TCGATCCGGC TGCGTTACAA TACGACCAAC AGAGCCTCGG CAGCACCCGG CAAAAACATC TGGAATTTAG ACATTCTACT TGAGGAAGCC GGTGGCATAG CATGGTTGAT CGACAAATAT ATCGACACAA AACAATACGA TGGATTCAGC GACAAAGACC CGCAGATATT CGGGACAACC TACTCCCAAT ACGTCAAACT CGAAACTAAA CTCGGAATGA CAAGAAATCT TTCGGACAAT CACCAGCTTG CCGGAAGAAT CCATCTCGGC TACATGATCC CTTATGGCAA AGCCGGCGCA ACCCCTGAAG AACGACGTTT TTATGCGGGA GGAGCCAACT CGATGCGAGG ATGGATGTAC AACACTCTCG GACCGGGCAG AAGCAACAGT GAGGCTGCGG CCAATTTCGG CGCAAACATC AAACTTGAAC TGGGTCTTGA ATACCGGTTG AAATTTTTCG AATTCCTCGG CCAGGCTTCC GGGGTGACCT TTTTTACCGA TATCGGCAAT ATCTGGGACA ATACCGGCCC TTATGCATTT AACCTTACAT CCCTGACCCG TGATTTTGCA TGGGACTTCG GAGCGGGACT TCGTATTGGT TCACCGATTG GGCCGCTACG CTTTGATTTT GCCTATAAAC TCCATGATCC CGGCGATGAG CATCCATGGA AAATATCAGA TTTCGACCCT CTTGATTTCA CTTTCCATTT TGGAATAGGC GAGACATTTT AA
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Protein sequence | MLFFKIVFRV ILQCLALSLF CGIALPAAAK SKMADTTEAL PASMYVNKIR FSGNKAVSSD ELLQIITTSP HSSFLGLGLF GGPKKPFIAE EFKKDLSLIK KLYTYKGYFF TEIASSISPR NNGKKIDIAI NIRENEPSRI DSLAYDGLES ITDDLRTAYL QKSVIKTNTI FSVERLIKER DRTMDFFREE GYAFFHEDSI RIKVDTVGTQ AGVLFKLRLP EKLTYGGVQA VVQNPFRSDT TGSKTTFLQD SVTVVIYGRQ NINPALLSKL TTMRPGRLTK DSREKETLQN LGATNVFSSI SIKPDSVRSG KLYTSINLEP APKHQIEPKL LIDNRYGSLF FGGALTYENR NLFGGAEQFK AATEFGTQAG YSKTFLSDLS EDQYEKVVPF EFSLKSSLIM PVITKPGNSY SAYVEYSAAK LPILLSTQIG LIRGTYSAKT GNASRINFDF FDFEWVKKDS LKGFRQLFKN DLASNIGIDP TDDAAVNAGI DSLLDARVNQ SIRLRYNTTN RASAAPGKNI WNLDILLEEA GGIAWLIDKY IDTKQYDGFS DKDPQIFGTT YSQYVKLETK LGMTRNLSDN HQLAGRIHLG YMIPYGKAGA TPEERRFYAG GANSMRGWMY NTLGPGRSNS EAAANFGANI KLELGLEYRL KFFEFLGQAS GVTFFTDIGN IWDNTGPYAF NLTSLTRDFA WDFGAGLRIG SPIGPLRFDF AYKLHDPGDE HPWKISDFDP LDFTFHFGIG ETF
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