Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_2104 |
Symbol | |
ID | 8368565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2520419 |
End bp | 2520805 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644984558 |
Product | RNA-binding S4 domain protein |
Protein accession | YP_003142209 |
Protein GI | 256820930 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAATTG ATAAGTACTT ATGGTGTGTG CGTTACTTCA AAACACGTAA TATAGCTACT GAAGCCTGCA AAAAAGGACA CATCAAAGTG AATGGTGAGA CTACAAAACC CTCAAGAGAA ATTTACAAAA ACGACCAAAT AGTAGTGCGT AAGAACCAAA TCAACTACCA AATAGAGGTC TTAGATATCC CTGAGAGCCG TGTGGGGGCT AAGTTAGTAG ACCTTTATCG CCAAGACAAC ACGCCACCTG AGGCTTTTGA ACAAGCCGAA ATACAAAAAC TTGCGCAAGA CTATTATCGC GAGAAAGGTG AAGGTCGCCC TACTAAAAAA GACCGCCGTG CTATTGATAA TCTCTTGAAT GACTTTCAAG AAGATAATGA ATTATAG
|
Protein sequence | MRIDKYLWCV RYFKTRNIAT EACKKGHIKV NGETTKPSRE IYKNDQIVVR KNQINYQIEV LDIPESRVGA KLVDLYRQDN TPPEAFEQAE IQKLAQDYYR EKGEGRPTKK DRRAIDNLLN DFQEDNEL
|
| |