Gene Coch_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2104 
Symbol 
ID8368565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2520419 
End bp2520805 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content40% 
IMG OID644984558 
ProductRNA-binding S4 domain protein 
Protein accessionYP_003142209 
Protein GI256820930 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTG ATAAGTACTT ATGGTGTGTG CGTTACTTCA AAACACGTAA TATAGCTACT 
GAAGCCTGCA AAAAAGGACA CATCAAAGTG AATGGTGAGA CTACAAAACC CTCAAGAGAA
ATTTACAAAA ACGACCAAAT AGTAGTGCGT AAGAACCAAA TCAACTACCA AATAGAGGTC
TTAGATATCC CTGAGAGCCG TGTGGGGGCT AAGTTAGTAG ACCTTTATCG CCAAGACAAC
ACGCCACCTG AGGCTTTTGA ACAAGCCGAA ATACAAAAAC TTGCGCAAGA CTATTATCGC
GAGAAAGGTG AAGGTCGCCC TACTAAAAAA GACCGCCGTG CTATTGATAA TCTCTTGAAT
GACTTTCAAG AAGATAATGA ATTATAG
 
Protein sequence
MRIDKYLWCV RYFKTRNIAT EACKKGHIKV NGETTKPSRE IYKNDQIVVR KNQINYQIEV 
LDIPESRVGA KLVDLYRQDN TPPEAFEQAE IQKLAQDYYR EKGEGRPTKK DRRAIDNLLN
DFQEDNEL