| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1989 |
|---|
| Symbol | |
|---|
| ID | 8368450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 2382411 |
|---|
| End bp | 2382959 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644984443 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142094 |
|---|
| Protein GI | 256820815 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0742] N6-adenine-specific methylase |
|---|
| TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAA TATCAGGGAA GAATAAAGGG AAACAGCTTA TAGCACCTAA TAAATTGCCA
GTTCGCCCTA CTACCGATTT TGCGAAGGAA GCTCTTTTTA ATATACTCAA TAACTATTAT
TATTTTGAAG AACTTTCTGT ACTCGACCTT TTTGCAGGAA CAGGAAATAT TAGCTATGAG
TTTGCCAGTA GAGGTTGCCC CTCAGTATTA TCAGTTGATA ACCATAACGG TTGTGTGCAA
TTTATCAATA AAATAGCACG TGAATTAGTC TACCCTATTA CAGCACTTAA AGCCGATGTA
TATGAATATT TAAAACGTAC TACTCAGCAG TTTGATGTTA TCTTTGCTGA TCCTCCGTAT
GATTTCCCGA TTGAAAAGTT TGTTACTATT GCCGATATTG TCTTCAATCA AAACTTACTT
ACTGAAAATG GAATGCTCAT TATTGAACAT TCGTCTAAAA CAGATTTATC AGAACAGCCA
TTCTTCTCAC AAGCGAAGAA ATATGGAGGG AACGTATTTA GTTTTTTTGA AAGAGAAGAA
CAAGATTAG
|
|---|
| Protein sequence | MRIISGKNKG KQLIAPNKLP VRPTTDFAKE ALFNILNNYY YFEELSVLDL FAGTGNISYE
FASRGCPSVL SVDNHNGCVQ FINKIARELV YPITALKADV YEYLKRTTQQ FDVIFADPPY
DFPIEKFVTI ADIVFNQNLL TENGMLIIEH SSKTDLSEQP FFSQAKKYGG NVFSFFEREE
QD
|
|---|
| |