Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1962 |
Symbol | |
ID | 8368420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2355757 |
End bp | 2356818 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644984413 |
Product | phosphoserine aminotransferase |
Protein accession | YP_003142067 |
Protein GI | 256820788 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGC ATAATTTTAG CGCAGGCCCC TCTATCTTAG CACCTGAGGT ATTCCAAAAA GCCTCTAAAG CCTTATTAGA TTTTGAGGGG ACTGGCTTAT CTGTAATAGA AATATCACAC CGCAGTCCAG AGTTTGTACG CGTGATAGAA CGCGCTCGTG CATTGGCATT GGAAATCGCT GGATTGGACG ATTCGTACAC TACACTCTTC TTGCAAGGAG GAGCTAGTAT GCAATTTTTG ATGGTGCCAT ACAACCTCCT CGAAACCAAA GCTGCTTATA TAGATACAGG TACTTGGGCT AACAAAGCAC AAAAGGAAGC TGCTCTCTTT GGCAATGCCG AAGTGATAGC CTCTTCTAAA GCCGATGGGT ATAAGTATAT TCCAAAAAAT GTGACTGTCC CTACTGATAT CGATTATCTG CACATCACTA CCAATAATAC GATTTACGGT ACCGAGTACC ACAGTTTACC TCAAACGAGC GTCCCTTTGG TAGCCGATAT GAGTTCTGAT ATTTTCTCAC GTCCGTTAGA CTACAAGCAG TTTAGTTTGA TTTATGCGGG TTCACAGAAG AATTTAGGAG CTTCAGGGTC TACCTTAGTG ATTGTAAAGA AGGATTTATT GGGCAAGGTA AGCCGTAAAC TGCCTTCGAT GATGGACTAC CAGTTGCATA TTAAAAACGA TAGTATGTTC AATACACCTT CTACTTTTGC AGTATATGTA AACCTATTAG TACTCGAATG GATACAAGCA CAAGGTGGAT TACAAGCCTT AGGCAAACGC AACCGAGCTA AAGCCGATTT GCTTTACGGA GAAATCGACC GCAATCCATT AGTAGTGGGG TATGCTAATA AAGAAGACCG CTCCCTAATG AATGTAGTGT TCAACCTCAC TGACGAAAGC ACCAAAGAAC GCTTTGACGC TTTGTGTAAA GAAGCCAATA TCAGTGGAAT AAAAGGACAC CGCAGTGTAG GAGGCTATCG CGCTTCTATC TACAATGCTT TGCCTTTACA AAGCGTACAA GTATTAGTAG ATGTACTTAA AGAATTTGAA CGCACCGCGT AA
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Protein sequence | MKKHNFSAGP SILAPEVFQK ASKALLDFEG TGLSVIEISH RSPEFVRVIE RARALALEIA GLDDSYTTLF LQGGASMQFL MVPYNLLETK AAYIDTGTWA NKAQKEAALF GNAEVIASSK ADGYKYIPKN VTVPTDIDYL HITTNNTIYG TEYHSLPQTS VPLVADMSSD IFSRPLDYKQ FSLIYAGSQK NLGASGSTLV IVKKDLLGKV SRKLPSMMDY QLHIKNDSMF NTPSTFAVYV NLLVLEWIQA QGGLQALGKR NRAKADLLYG EIDRNPLVVG YANKEDRSLM NVVFNLTDES TKERFDALCK EANISGIKGH RSVGGYRASI YNALPLQSVQ VLVDVLKEFE RTA
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