Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1948 |
Symbol | |
ID | 8368406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2338200 |
End bp | 2341469 |
Gene Length | 3270 bp |
Protein Length | 1089 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 644984400 |
Product | DNA modification methylase |
Protein accession | YP_003142054 |
Protein GI | 256820775 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.89671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATT TAAGACAAAT ACTCTCATCT TCTTATCGTC AGGAGGATTG GATTAGCTTC TTGAAAGAAC TTTTTGCTCA TAGTTCAGGT ACAGGAGCTA TATTGCAAAA ACCTCAAATA ATAGAGCTTC CTAAAAGTGA AAAAGTAAAA GAAGCTTATG AATTAGGTAA TTATGAAACT ACTGAAGGGA GGCTTATTGG TATTTATCAA GTAAATATTA GTGAAGATAT GTTGCTTTAT CGCAACAAAG TAGGTCTTCG CCAATTGATG AAGAATATCT ATAAATACAA TGTAGATGGC GTGTTAGTAG TTTTTGTACA AGAAAAGAAA TGGCGGTTGT CATATATTTC TGAAATCATA AAAGAAGTAG ATGAAAAAGG TAAGATTATT AAGGAAATTA CCAATGAAAA ACGCTTTACT TACTTGTTAG GAGAAGGAGA AAAAACAAAA ACGGCTACAG ATAGACTTCA ACTTTTAGTA GGAAAAGAAC TTTCGTTAGA AGATTTTAAA AATGCCTTCG CAGTAGAGGC TCTTAATAAT GATTTCTTTG ATAGATATAA GGATATCTAT GAAGATTTTG TACAACATAT TACAGGGGTT CGTTACGAGA AGAAGGGAAA CAAGTATCAG GAAAATAAAA AACATCAACC TCATCCTAAC TTTGATGGTT ACAAAGATTA TAGAGGATTT TCTACAATTC TACATCCTGA TAGTGAAACC AAGCCTTTCA AAAATAGAGA GTTTCAAAAT CTTTTTGGAG GAAATGAAAA AGCCGTTCGT GATTTTGTAA AACGAATGAT GGGCCGTATT GTATTTTTGT ACTTTATACA GAAAAAAGGT TGGTTAGCCG TGCCTAAGGG AAAAAAATGG GGAGAAGGTA ATTATGATTA TCTATATCAA TTGTACAAAG AAACACCTAA AGAAGACCAA CCTTATTTTT ATGAAAAACG TTTGGTACCA TTATTTTTTG AATGTTTTAC AGATAAAAAG TCAGAGAGTG AAACAAATGA CTTGCGTTTT CCTTATCTTA ATGGTGGGTT ATTTGATAAA ACACAAGACC AACACTTTGA TAAGGTAAAT TTGCCTTACT CTATTTTTAC TGAACTTTTT GATACCTTTA ACTCCTACAA CTTTACCGTC TATGAAGATG CTCCTAATGA ACATACTGTA GCTGTAGACC CTGAGATGCT AGGGCATATC TTTGAAAACC TTTTGGAAGA CAATAAGGAT AAAGGAGCTT TCTACACCCC TAAAGAAATT GTACATTATA TGTGCAAAGA AAGTCTAAAA ACCTTTTTAC TTTCTAAAAT AGTTCCAGAT AATAATCAAT CAGAAAAAGC CAAAGATGTT ATTACAAAAA TAATAGAGCA CCAACCACTT AATGAAGACG AAAAAATCTA TGTGATAGAA AAAGGGGATG TTATTACTAC CTCTTTAGAA AATGTAAAAA TATGTGATCC TGCTATTGGG TCTGGGGCCT TCCCTATGGG ACTTTTGCAA GAAATATACT ATATCAAAAT CACCTTGCAA CAATTAGGAA TAACAACAGA ACAGACCGAT GCTCAGATTA AAAAACATAT CATTGAGCAA AATATCTATG GAGTTGATAT TGATGCAGGT GCAGTAGACA TAGCCCGTTT GCGCTTTTGG TTAAGTTTGG TAGTAGATGA ACATCTTCCA CAACCTCTTC CTAACTTAGA CTTTAAGATT ATGCAAGGAA ATAGTTTGTT AGAAAGTTAT CAGGGAGTAG ATTTGAGCCT TATAGGGAGT GAAGAAGAAG CCACAGATAC CGCAATTGAC TATGGAGACG AATATATCTC CCCCCAACAA CTACCCCTTT TAAATAAAGC TCATAAGGAA AAGATACAAC AACTTATGAA AGACTTCTTT TCCTCAACAG AAGATAAAAA CCTTAAGCGC AAAGAAATCA ATGATCTTAT AGAAGGACAA ATACACTATA AAATTATCTT TGAGAAAAAT CAAGTAAAGA AAAAAATAGA AGGTTTTGAA AAAAAATTTG GTATTACTTC TCAAGAAGAC CTAATAGAAA AACTCCAAAA AGGTATTCTT ACTTCAAAAG GGAAAGAGTA TAAAGCCTAT ATGGCTGATA AAAACCGCCA CTTAGAGCTT GATCACATAG AAAAAGAACT TATCAGTTTC CAAACCAAAA TAGAACGTCC TTATTTCCTT TGGCATACTT ATTTTGGTGA TGTAATTAAA GGGGCAAATA ATTTAGACAA CTCTGGCTTT GATATTGTTA TTGGTAATCC ACCGTATGGA GCTAAACTTT CACAAGAAGA TAAAGAGGTT TTAAAGAAGA AGTATATATC AGCTCAAACT ATTAAAGGAG TACAAAAAGG TTCATTAGAT ACATATACAC TTTTTATTGA ATTAGGCTAT AACCTATTAA AAAAACAAGG TTATTTAGGC TTTATAGTGC CTTTAAGTGT AACCTCTTCA GACGCTCTAT CAGGGTTACA TAATTTGTTA ATTAACAACT GTGAAGTAAT AAAAATAAGC TCTTATGGAG ACAGACCTAA AAGAGTTTTT GAAAGCGCAG AGCAGCAAGT TTCTATTATA TCATTTTTAA AAACACAAAC AGAAGCTAAA GAAATTTTAA TGACTGGAAT TAACAAAAGA TATTCTGACG ATTCTTTATG GGTATTATTA GATAACCTCA AGTTTTCTAA TGCTATAGGA CTTTTATCTT ATGGAAGAAT TCCTAAAATA GGAACAAATA CAGAACAAAT TATACTTCAA AAATTACTAA AAAATAGCAA CTTATTATCT GATTTAAAAA CTGAGAAAGG TAGTTCTATC TACTATAGAA AAGCAGGAGG GCGATACTAT AAAATTATAA CGAAAGATTC AACAGAATCA AGTGCTGAAG GGAGTATAAT TATAGAAAAT AGGTATTTAG ATCTTGTAGG AGCTATATTA TCAAGTAATC TTTTTTATTG GTTTTGGCTC ATCCATTCTG ATTGGCACAA TATGAGAACT TCTGAAATAG AGAATTTTCC TATTCCATAT AATAATTTTA ATGATAAAAC TTTAGAACAA ATATCAAAGC TCTATAATAT CTATCTTACT GATTTAAAAA AGAATGCTAA AAAAACTGTT ACGGGTTTAA ATGTATTTGT TGCAAGAAAA TCAAAACATA TCATAGACCA AATAGATGAT CTTATTTGCC CTTTGTATGG TCTTACTCAA GAAGAAACAG ACTTTATAAA AAACTATGAA ATTGAATTTA GACTATCTGA TAATGATTAA
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Protein sequence | MKDLRQILSS SYRQEDWISF LKELFAHSSG TGAILQKPQI IELPKSEKVK EAYELGNYET TEGRLIGIYQ VNISEDMLLY RNKVGLRQLM KNIYKYNVDG VLVVFVQEKK WRLSYISEII KEVDEKGKII KEITNEKRFT YLLGEGEKTK TATDRLQLLV GKELSLEDFK NAFAVEALNN DFFDRYKDIY EDFVQHITGV RYEKKGNKYQ ENKKHQPHPN FDGYKDYRGF STILHPDSET KPFKNREFQN LFGGNEKAVR DFVKRMMGRI VFLYFIQKKG WLAVPKGKKW GEGNYDYLYQ LYKETPKEDQ PYFYEKRLVP LFFECFTDKK SESETNDLRF PYLNGGLFDK TQDQHFDKVN LPYSIFTELF DTFNSYNFTV YEDAPNEHTV AVDPEMLGHI FENLLEDNKD KGAFYTPKEI VHYMCKESLK TFLLSKIVPD NNQSEKAKDV ITKIIEHQPL NEDEKIYVIE KGDVITTSLE NVKICDPAIG SGAFPMGLLQ EIYYIKITLQ QLGITTEQTD AQIKKHIIEQ NIYGVDIDAG AVDIARLRFW LSLVVDEHLP QPLPNLDFKI MQGNSLLESY QGVDLSLIGS EEEATDTAID YGDEYISPQQ LPLLNKAHKE KIQQLMKDFF SSTEDKNLKR KEINDLIEGQ IHYKIIFEKN QVKKKIEGFE KKFGITSQED LIEKLQKGIL TSKGKEYKAY MADKNRHLEL DHIEKELISF QTKIERPYFL WHTYFGDVIK GANNLDNSGF DIVIGNPPYG AKLSQEDKEV LKKKYISAQT IKGVQKGSLD TYTLFIELGY NLLKKQGYLG FIVPLSVTSS DALSGLHNLL INNCEVIKIS SYGDRPKRVF ESAEQQVSII SFLKTQTEAK EILMTGINKR YSDDSLWVLL DNLKFSNAIG LLSYGRIPKI GTNTEQIILQ KLLKNSNLLS DLKTEKGSSI YYRKAGGRYY KIITKDSTES SAEGSIIIEN RYLDLVGAIL SSNLFYWFWL IHSDWHNMRT SEIENFPIPY NNFNDKTLEQ ISKLYNIYLT DLKKNAKKTV TGLNVFVARK SKHIIDQIDD LICPLYGLTQ EETDFIKNYE IEFRLSDND
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