Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1905 |
Symbol | |
ID | 8368363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2293273 |
End bp | 2293719 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644984357 |
Product | HTH_3 family transcriptional regulator protein |
Protein accession | YP_003142011 |
Protein GI | 256820732 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAACA CATCAGACTT TGCCATTCGC TTACAACAAG TGATGGATTA TTACGGTTTA AATGCTGCAG CCTTTGCTGA TAGCTTAGAG ATTCAGCGTT CAGGGATTTC TCATCTCTTA TCAGAACGCA ACAAACCGAG CTTGGATTTT ATTCTAAAGC TCATCGAAAA ATTTCCTGAA GTAGATATGT ATTGGATTAC ACAAGGAAAA GGAAGTTTCC CTCGTAAGGA AGATAAAGAG CTTGCCAGTG CTAAAAAAAC GGAACAACCT GACCTTTTCA GTGATATTCC TGAAATAGAA ATGCAAGCCT CTACTCCTGC TCCACCTTCT GTTGCAATAA AAGAAAAGCA AGTAGAGCCA AAAGCCTTAC CATTACTCAC TAATAAGCAT ATTAAACGAA TTATTTTCTT TTATGAAGAT AATCGCTTTG AAGTTTTTGA AAATTAG
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Protein sequence | MLNTSDFAIR LQQVMDYYGL NAAAFADSLE IQRSGISHLL SERNKPSLDF ILKLIEKFPE VDMYWITQGK GSFPRKEDKE LASAKKTEQP DLFSDIPEIE MQASTPAPPS VAIKEKQVEP KALPLLTNKH IKRIIFFYED NRFEVFEN
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