Gene Coch_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1905 
Symbol 
ID8368363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2293273 
End bp2293719 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content36% 
IMG OID644984357 
ProductHTH_3 family transcriptional regulator protein 
Protein accessionYP_003142011 
Protein GI256820732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAACA CATCAGACTT TGCCATTCGC TTACAACAAG TGATGGATTA TTACGGTTTA 
AATGCTGCAG CCTTTGCTGA TAGCTTAGAG ATTCAGCGTT CAGGGATTTC TCATCTCTTA
TCAGAACGCA ACAAACCGAG CTTGGATTTT ATTCTAAAGC TCATCGAAAA ATTTCCTGAA
GTAGATATGT ATTGGATTAC ACAAGGAAAA GGAAGTTTCC CTCGTAAGGA AGATAAAGAG
CTTGCCAGTG CTAAAAAAAC GGAACAACCT GACCTTTTCA GTGATATTCC TGAAATAGAA
ATGCAAGCCT CTACTCCTGC TCCACCTTCT GTTGCAATAA AAGAAAAGCA AGTAGAGCCA
AAAGCCTTAC CATTACTCAC TAATAAGCAT ATTAAACGAA TTATTTTCTT TTATGAAGAT
AATCGCTTTG AAGTTTTTGA AAATTAG
 
Protein sequence
MLNTSDFAIR LQQVMDYYGL NAAAFADSLE IQRSGISHLL SERNKPSLDF ILKLIEKFPE 
VDMYWITQGK GSFPRKEDKE LASAKKTEQP DLFSDIPEIE MQASTPAPPS VAIKEKQVEP
KALPLLTNKH IKRIIFFYED NRFEVFEN