Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1899 |
Symbol | |
ID | 8368357 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2287121 |
End bp | 2288225 |
Gene Length | 1105 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644984351 |
Product | peptide chain release factor 2 |
Protein accession | YP_003142005 |
Protein GI | 256820726 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0199155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACA ACGAACAAGT AAAGGATTTA GTGAATCGCC TGGGTGCGTT AAGGAGGTAT CTTTGACGTA GATGCCAAAC GCATTGAAAT AAGCAACGAA GAAGAAAAGA CTTTTGCACC TGACTTTTGG GACAATGCCA AAGAAGCTGA GAAAGTGATG CGCGAGCTTC GCACTAAAAA GAAATGGGTG GAAGACTATG AGGAAGCCGA AAATCTTACC TCGGATATAG AAGTACTACT TGACTTTTTT AAAGAAGGCG AAGCTACTGC GGAGGATGTA GACCACCAAT ACACCCAAGC CTTACACGCT ATTGAAGCAT TGGAGTTCCG CAATATGCTT TCGGACGAGG GCGATACGAT GAGTGCGGTA TTGCAAATTA CGGCAGGCGC AGGTGGTACT GAAAGCTGTG ACTGGGCATC GATGCTACTA CGTATGTACA CGATGTGGTG CAATAACCAA AAATATAAGG TAAAAACACT TAACTTCCAA GAAGGTGATG TGGCAGGAGT AAAAACCGTT ACCATAGAGA TTGAAGGCGA ATACGCTTTT GGCTACCTAA AAGGTGAAAA TGGCGTACAC CGATTGGTAC GCATCTCACC TTTTGATAGT AATGCTAAAC GCCATACCTC TTTTGCCTCG GTATACGTGT ATCCTTTGGT AGATGATACT ATTGAAATAG ATATTAATCC CGCTGATATT ACCTTTGAGA CGATGCGCTC CAGTGGTGCT GGCGGGCAGA ATGTAAACAA GGTAGAGACA GCTGTACGTT TGCGTCACCA CCCTACGGGT ATCATTATTG AGAATTCCGA AACCCGCAGT CAGTTGGATA ATAAGAACAA GGCGTTGCAA CTACTCAAAT CGCAGTTGTA TGAGATAGAG CTCAAAAAGC GTCAAGCCAA GCGCGATGAG ATAGAGGCAG GAAAGATGAA GATAGAATGG GGCTCACAAA TACGCAACTA TGTAATGCAC CCCTACAAAC TTGTGAAAGA CGTACGCACC AATTACGAAT CTACTGATGT AGATAGCGTA ATGAACGGTG AATTAGATGA GTTTCTCAAA GCCTACCTAA TGCTTATGGG TACGAGCCGT ACGGGCGATT TGTAA
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Protein sequence | MTNNEQVKDL VNRLGALRRY FDVDAKRIEI SNEEEKTFAP DFWDNAKEAE KVMRELRTKK KWVEDYEEAE NLTSDIEVLL DFFKEGEATA EDVDHQYTQA LHAIEALEFR NMLSDEGDTM SAVLQITAGA GGTESCDWAS MLLRMYTMWC NNQKYKVKTL NFQEGDVAGV KTVTIEIEGE YAFGYLKGEN GVHRLVRISP FDSNAKRHTS FASVYVYPLV DDTIEIDINP ADITFETMRS SGAGGQNVNK VETAVRLRHH PTGIIIENSE TRSQLDNKNK ALQLLKSQLY EIELKKRQAK RDEIEAGKMK IEWGSQIRNY VMHPYKLVKD VRTNYESTDV DSVMNGELDE FLKAYLMLMG TSRTGDL
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