Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1895 |
Symbol | |
ID | 8368353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 2281881 |
End bp | 2283782 |
Gene Length | 1902 bp |
Protein Length | 633 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644984347 |
Product | ATP-dependent DNA helicase, RecQ family |
Protein accession | YP_003142001 |
Protein GI | 256820722 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATG AACCTCTGTA CATACTCAAA AAGTATTGGG GGTACGATGG TTTTCGCAAC TCTCAAGAAG CTGTTATCAA CTCGGTATTA TCCGGAAAAG ATACCTTAGC CTTATTGCCT ACGGGTGGAG GAAAGTCTAT TACTTTTCAA GTGCCTGCTA TGATGAAAGA AGGCATCTGT ATAGTTGTTT CTCCCTTAGT AGCCCTAATG ACAGACCAAG TAGAGGCGCT TAAAAATAGA GAAATACGTG CACTATCGTT AGCGGGAGGT CTCCCCTACT CTGAGTTGGA ACGCTTGCTA GACAATGCTC TCTATGGGCA ATATAAATTC TTATACCTGT CCCCTGAACG TCTGCAACAG GAATTGGTGC GCTCTTATCT CAAAGCAATG TCTATTAACT TAATAGTGAT AGACGAAGCA CATTGTGTAT CACATTGGGG TAAAGATTTT CGTCCTGCTT ATTTACAGTG TAAATGGCTG AAAGAAGAAT TTCCTAACGT CCCATTATTG GCACTCACAG CTTCGGCAAC GCATCAAGTA CAGCAAGATA TCTTACATCA TTTAGGTATA GAAAATGCTA CTGTTATCAC TACTTCTTTA GCACGCCCTA ATATCGCTTA CAAAGTGTAT AAGGTTTCCG ATAAATGGCA CGAGTTACTA CAACTGTTAA GAAAGACCGA AGGAAGTGCT ATCGTATACT TGCGCAGCAG AAATGGTTGC ATACAATTGG CTGAACTATT GCAGAATCAC GGTATCTCAG CAGCCTATTT TCACGGAGGT CTTCCTGCCG AAGAAAAGAA TAAAAAGCTC AGTATGTGGT TGCTGAACGA TGTGCGTGTA ATGGCAGCTA CCAATGCTTT CGGAATGGGG ATAGACAAAC CTGATGTGCG TTTCGTAATT CATTGGGATA TACCTCAAAC CTTAGAGGAC TATTTTCAAG AGGCTGGACG TGCAGGTCGC GATGGTAACC CAGCCGAAGC TATCCTATTC TATGGTAAAA TCGACGTTGA AAATGCTAAT AAACTGCTAA AAGACTACTT GGTAGACATT CCTTTTCTCA AGCTACTTTA TGCGAAACTT AATGCTTATT TTCAAATAGC AATAGGTGAA GGACAAGAAG GGGTTTTTAG TTTCTTTTTC CCCGACTTCT GGAAGCGTTA TCAGCTATCG CCCATAAAGT CCTATAATGG TTTGCAGGTG TTAGACCGAA TGTCTATTAT TTCACTCAGC CAGCAATTTT ACAAGAAGGT TACTTTGCAT ATTACAGCTC CTGCCCCTCA ACTTATTACT TATTTACAAA CGCATCGTTA TCTAAAAAAT CTTGTTATCT ATCTCATAAG GTCTTACCCT CTTATCTACA GTCAGCCTAT AGCTTTGGAG ATGGAAAAAA TCACTGAACT CACAGAACTC GACTATCGTG ATATCATCAA AAATTTAGAA CATTTGCACA ACGATGGAAT GGCTATCTTA AAAAACGAAG CTTCTGATAT TCAAATTGTC TTTAATGTGC CTCGTGATGA TGATCGCACT ATCAATAGTA TTTCTAAAAA CTTAAAAGAG TACAATCACA CCAAGCTAAG CTTGCAAGAA GCAGTATTCC GCTATCTTCA AAATGAGGAT ACTTGTCGCA ACATTCAGCT CTTAGAATAC TTCGGTGAAA AATCCGAGAA GCCTTGTGGA GTATGTTCAA ATTGTATTGC CAAACTACCT CCTTCAAAAG TTGATAAAAA AGAGGTTAAA AAAGCGGTTT GGAGTTTATT GAAGTCTAAA CCTATAACCC CCAATGAGCT CTTTATCGCA TTGCCGTTCC CTGAAAAAGA TATCAATAAG GTTTTGGAAG AACTTTTGTA TATGCAAAAA ATAGCTTACA ACAACTGTAA TGAATTAGTT GTTAATTCCT AA
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Protein sequence | MENEPLYILK KYWGYDGFRN SQEAVINSVL SGKDTLALLP TGGGKSITFQ VPAMMKEGIC IVVSPLVALM TDQVEALKNR EIRALSLAGG LPYSELERLL DNALYGQYKF LYLSPERLQQ ELVRSYLKAM SINLIVIDEA HCVSHWGKDF RPAYLQCKWL KEEFPNVPLL ALTASATHQV QQDILHHLGI ENATVITTSL ARPNIAYKVY KVSDKWHELL QLLRKTEGSA IVYLRSRNGC IQLAELLQNH GISAAYFHGG LPAEEKNKKL SMWLLNDVRV MAATNAFGMG IDKPDVRFVI HWDIPQTLED YFQEAGRAGR DGNPAEAILF YGKIDVENAN KLLKDYLVDI PFLKLLYAKL NAYFQIAIGE GQEGVFSFFF PDFWKRYQLS PIKSYNGLQV LDRMSIISLS QQFYKKVTLH ITAPAPQLIT YLQTHRYLKN LVIYLIRSYP LIYSQPIALE MEKITELTEL DYRDIIKNLE HLHNDGMAIL KNEASDIQIV FNVPRDDDRT INSISKNLKE YNHTKLSLQE AVFRYLQNED TCRNIQLLEY FGEKSEKPCG VCSNCIAKLP PSKVDKKEVK KAVWSLLKSK PITPNELFIA LPFPEKDINK VLEELLYMQK IAYNNCNELV VNS
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