| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1845 |
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| Symbol | |
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| ID | 8368293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2206748 |
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| End bp | 2208406 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644984287 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_003141951 |
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| Protein GI | 256820672 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.34764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACA CTCTATCTAT AAAAAATTAT GCATTAATTG ATGACCTAAA AGTTGACTTC
CCTAAAGGCT TTATTATTAT CACAGGCGAA ACAGGTTCAG GAAAATCTAT AATGCTTGAC
GCTCTTTCCT TAGTATTGGG GAAACGTGCC GATATGTCTG CTTTGAGGAA TAAAGATGAA
AAATGTGTAA TTGAAGCCGA ATTTTCTTTA CAAAATTATG AATTTCAATC TCTCTTCAAT
GAGCTGGAAA TAGATTATGA CCCTCAAACT ATTATACGTC GTGAAATTCT TCCTTCGGGA
AAATCTCGAG CTTTCGTGAA TGATTCTCCT GTAACATTAG ACGTGCTTTC ACGTTTAGGT
GAAGTACTCG TAGATATTCA TTCTCAGCAT CAAACTCTTT CTCTAAGCGA ATCAGCTTTT
CAGTTTGAGA TTATAGATGC AATGGCTGAA AATAAATCTT TGTTAGAGGA ATACCAACGC
CTTTTAGTAC TACTTAAAAA CGAACAAAAG AAACTACAAG AGCTCATAGA TTTCCAACAG
ACAGCTAATA AAGAATACGA TTACAATCTG CACCAACTCA AAGAACTGAA ATCGGTTACT
TTAGGAGAAG GCATTTTGGA GGAATTAGAA GAAAGCTATG AAGAAGCCTC CAACATCGAA
GAGATAAAAG AAAATGTAGC TGAAAGTTTA TATTTGCTCA ACGATGAGAA CATAGGTATT
TTAAATAATT TGCGTGAACT GCGTCGCGCT TTTTCAAATC TTACAGAATA CAAACAGCAA
TACCGTGAAT TGTACGAACG CATTGACTCG GCTTTCTTAG ATTTAGAAGA TTTGAGTAGA
GATGTAGCAG ACATTGATGA AAACATAGAA ACAGACCCAG AAAATTTAGA GGAAATATCT
AAGCAACTCA ATAAAATCTA CTCACTTCAG CAAAAGCACA AAGTAACAAC TGTTGAAGAG
TTGATGAGTA TTCAAGAGCG TTTAGAGAAG GCTGTTTCTA AAACTGAAAG CGCAGATTTC
GACCTTAAAG AACAACAAGA GTTAGTTGCA AAACAACAAG CAGAAACCTC TAAAAAAGCA
ACTGAGTTAC ACAAAACTCG TGAAAAAGTA ATTCCTACTC TCACTAAACA ATTAGAGAGC
TTTATGCACG AATTAGGAAT GCCCAATGGG CGTTTTGATA TCAAGCTAAC ACCTACCTCA
CATTTCTTTA ACAACGGAAA TGATGAGCTC TCATTTTTAT TTTCTGCCAA TAAAGGAGGA
GATTTTGGAC CATTAAAGAA AGTAGCTTCA GGAGGAGAAT TATCACGTAT AATGTTAGCT
GTAAAAGCAA TAATGGCAGC ACATACAGCA CTCCCTACTA TTATGTTCGA CGAAATTGAT
ACAGGAGTAT CAGGTGAAAT CTCTCAAAAA ATGGGTGATA TAATGAAACA AATGAGCAAA
AACAGACAGG TATTTGCTAT TACCCATTTA CCACAGATAG CTGCTAAAGG TGCTTATCAT
TTTAAAGTAT TTAAAGAAGA TATAACAGGT AAGACAACTA CCCATCTTAA AATGCTCACC
GAACAGGAAC GCATTTCAGA ACTTTCAGAA ATGCTTGAAG GAAAAAATAG TGGCGAATCA
GCTCGTAATC ACGCAATAGA ACTTTTAAGA AAAGGATAA
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| Protein sequence | MLNTLSIKNY ALIDDLKVDF PKGFIIITGE TGSGKSIMLD ALSLVLGKRA DMSALRNKDE
KCVIEAEFSL QNYEFQSLFN ELEIDYDPQT IIRREILPSG KSRAFVNDSP VTLDVLSRLG
EVLVDIHSQH QTLSLSESAF QFEIIDAMAE NKSLLEEYQR LLVLLKNEQK KLQELIDFQQ
TANKEYDYNL HQLKELKSVT LGEGILEELE ESYEEASNIE EIKENVAESL YLLNDENIGI
LNNLRELRRA FSNLTEYKQQ YRELYERIDS AFLDLEDLSR DVADIDENIE TDPENLEEIS
KQLNKIYSLQ QKHKVTTVEE LMSIQERLEK AVSKTESADF DLKEQQELVA KQQAETSKKA
TELHKTREKV IPTLTKQLES FMHELGMPNG RFDIKLTPTS HFFNNGNDEL SFLFSANKGG
DFGPLKKVAS GGELSRIMLA VKAIMAAHTA LPTIMFDEID TGVSGEISQK MGDIMKQMSK
NRQVFAITHL PQIAAKGAYH FKVFKEDITG KTTTHLKMLT EQERISELSE MLEGKNSGES
ARNHAIELLR KG
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