| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1842 |
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| Symbol | |
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| ID | 8368290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2201855 |
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| End bp | 2205031 |
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| Gene Length | 3177 bp |
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| Protein Length | 1058 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644984284 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_003141948 |
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| Protein GI | 256820669 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.844387 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAA TTAAACTTTC TATTAAGCGT CCCAGTGTAC TTATTGTGAT GCTCTTGTTG
TTGCTACTTG GTGGCTTCTA TTCGTATAAG TTATTGAACT ACGAGCTCAT TCCTAAGTTT
GAAGTGAATG TAGTTACGAT CTCTACTGTG TATGCGGGAG CCTCTCCTTC GGAGATTGAG
AGCACCGTGA CAAAGAAAAT TGAGGATGCC GTTTCGGCTT TGGAAAATAT CAAAAAGATA
TATTCATACT CGTACGAAAG TCTTTCGGTG GTAGTAGTAC AACTTACTAA CGATGCGAAT
GTAGATAACA CCCTTAATGA GGCACAGCGC AAAATTAATG CAATAAGAGC TGATTTGCCC
GATGATGCTA AAGAGCCATC ATTGAGTAAA TTCTCTCTTT CCGATTTGCC TATTGTGTCT
ATTGGGGTAA CTTCTAAGTT ATCGGCACAA GAATTGTACG ACTTGGTAGA TAAAAAAATA
CAGCCAGAGT TATCACGTGT TCCAGGAGTA GCACAAGTGA ATATAATAGG TGGTCGCAAA
CGCGAAATAC GCGTGAGCAT TGATGCTAAG AAGTTAGAAG GTTATGGTCT TTCTATTGCT
CAAGTACAAC AGCTAATCGC GGCTTCGAAT ATGGAAATTC CTGCGGGTAA AATTAAAACT
CGTGAGAATA GTACCTCTAT ACGTTTGCTT GGTAAATTAC AAGATGTAGA ACAATTGCGC
AACCTTATAC TTGCTTCACA GAATGGAGTA GAGATACGAC TTTCGGATGT AGCTGATGTG
CAAGACACCG AAGAAGAAGC TACCAAAATA GCGCGTATAG ACCAAGAAAA TACTCTCTTG
CTACAAGTAT TGAAACAAAC CGATGCTAAT GCTGTATCGG TGAGTGAGTT GGTACGCAAG
AAGATGGAAC AAGTGGAGCA GACTTATAAA AATGAAGGTG TAAAGATGCT ATTGGCTGAA
GATACCAGTG AGTTTACCTT GGAAGCAGCC AACTCTGTAA TGTCCGATTT GATATTGGCA
ATTGTATTAG TAGCAGTAGT GATGTTCTTC TTCCTTCACA GCCTGCGTAA TGCTCTTATC
GTAATGGTAT CTATACCTAC TTCTCTCATT GCTACTTTTA TAGGTATGTA TTTCTTTGGT
TTTACACTGA ACTTGATGAG CCTTGTTGCC CTCTCGATGG TGGTAGGTAT CTTGGTGGAC
GATGCTATTG TAGTATTAGA AAACATTCAC CGTCATATGG AGATGGGTAA GAATAAAGTG
CGTGCTGCTT TTGATGGCTC TAAGGAAATT GTGCTTACTG TAATGGCAAT TACCTTAGTA
ATTGTGGTAG TGTTCGTTCC TATTTCATTA GGTAATGCTA TTGTAGTAAA AGTATTGCGT
GAGTTTTGTT TGACTGTAGC TATTGCTACA ATGCTTTCAT TATTGATGTC TTTTACAGTA
GTCCCTTGGT TGTACTCTAG GTTTGGAAAA TTAGAGCACG CAAATCCCAA TTCATTTTTA
GGAAAGATGA CCATAGGATT TGAAGGATAC CTCAAACGCT TTACACAGTT CTTCTCTGAC
TTATTGGTAT GGGTATTTGC CAATAAATGG AAAACTATTA TTTTGGTATT TTTCCTTTTT
GTAGGTTCTT GTTCATTCAT TCCTACTGGA TTTATCGGAT CTGAGTTTAT GCCTAATATG
GATAGAGGAA AGTTTTTAGT ACAGTTTGAA TTGAATAAAG ATGCTTCCTT AGAGCAGACT
AACTTTATGA CCCAAAAAGC TGAAAATTAT CTTCGTAGCT TAAAAGTAGA GGGTACCAAT
AAACCTTTGG TAGAGAGTAT GATTACTACT GTAGGACAGT CTACCAGTGG TATGGGAGCT
TCACAAGCAA CCCCTTACAA ATCGGAAATA CAGCTTACTA TTATCGATAA AAAAGAACGT
AATGAATCGA CTAACGTAAT TGCGGCAAAG CTGAAACGTG AACTGAGTCA GTATTTAGTA
GAAGCTAAAG TGAAGACTGT ACCGGTAGGA ATGATGGGAG CCGAACAAGC ACCAATTGCT
TTGGTTGTTA CTTCTGACAA TGTGGAAGTA GCCCAACAGT ACGCTGAGAA AACGGCTGAG
CTTCTTAAAA CTGTTGAAGG TGCTACTGAA ATTAAGCTTT CCTCAGAATC TGGTAATCCT
GAAATAAATG TGCAGATAGA CCGCGATAAG ATGGCAATGT TAGGACTTAA TATTGCTACT
GTAGGGGGAA CGATGCGAAC CGCTTTTAAT GGTAATGACG ACAGTAAATT CCGTACAGGA
GATTCAGAAT ACAATATTAA TATAGTGTTT GAAGAAGGTA GCCGTCAGTC TATAGACGAT
ATAGAAAATA TGATGTTTAT CAACTCGGTG GGACAACAGG TAAAACTATC ACAATTTGCG
ACTATAGCTT ACGCTTCAGG ACCTACACAG CTGGAACGTT ATGACAAATC TCCTTCGGTA
ACAGTACAAG CACAATCGGT AGGTCGTCCT ACAGGTACTA TAGTTTCAGA ATGGAAAACT
AAGATAGACC AATTAGAAAA ACCTGCTAAC GTACACTTTG TGTTTACGGG TGACCAAGAG
ATGCAAGATG AAGGTTTCGG TACCTTGTTT ATATCGCTCT TTGCAGCTAT TCTCTTAGTT
TATATGGTAA TGGTAGTATT ATACGACAGT TTTTCACGAC CTTTTGTGGT ATTGTTCTCT
ATACCGCTTT CGTTCATTGG AGCTTTAGTA GCTTTGGCAT TAGCCAATAT GTCACTCAAT
ATCTTTACTC TTTTAGGTAT CATTATGCTT ATCGGGTTGG TTGCTAAGAA CGCGATTATG
TTAGTAGACT TTGCCAACCA CCGCAAGCAA GAAGGAGAAG ATACTGTAAC TGCATTAATA
CAAGCAAACC ACGCGCGTTT ACGCCCTATC TTGATGACGA CTATCGCAAT GGTAGCAGGT
ATGATTCCGC TTGCTATTGC CAATGGAGCA GGTGCCGAAG TGAACAATGG TTTGGCGATT
GTAATTATAG GTGGACTTAT TTCCTCATTG TTCTTAACAC TTATTGTAGT GCCTTTGGTA
TACCTTATTT TTGACAATAT TGGCAGACGT TTCGGTAAAG GTACTAAGAC TGATTACGAA
AAACTGATGA TTGCTGATTA CGAGCACAGA GACATCAAAG GCGAACACGA AGTATAA
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| Protein sequence | MDLIKLSIKR PSVLIVMLLL LLLGGFYSYK LLNYELIPKF EVNVVTISTV YAGASPSEIE
STVTKKIEDA VSALENIKKI YSYSYESLSV VVVQLTNDAN VDNTLNEAQR KINAIRADLP
DDAKEPSLSK FSLSDLPIVS IGVTSKLSAQ ELYDLVDKKI QPELSRVPGV AQVNIIGGRK
REIRVSIDAK KLEGYGLSIA QVQQLIAASN MEIPAGKIKT RENSTSIRLL GKLQDVEQLR
NLILASQNGV EIRLSDVADV QDTEEEATKI ARIDQENTLL LQVLKQTDAN AVSVSELVRK
KMEQVEQTYK NEGVKMLLAE DTSEFTLEAA NSVMSDLILA IVLVAVVMFF FLHSLRNALI
VMVSIPTSLI ATFIGMYFFG FTLNLMSLVA LSMVVGILVD DAIVVLENIH RHMEMGKNKV
RAAFDGSKEI VLTVMAITLV IVVVFVPISL GNAIVVKVLR EFCLTVAIAT MLSLLMSFTV
VPWLYSRFGK LEHANPNSFL GKMTIGFEGY LKRFTQFFSD LLVWVFANKW KTIILVFFLF
VGSCSFIPTG FIGSEFMPNM DRGKFLVQFE LNKDASLEQT NFMTQKAENY LRSLKVEGTN
KPLVESMITT VGQSTSGMGA SQATPYKSEI QLTIIDKKER NESTNVIAAK LKRELSQYLV
EAKVKTVPVG MMGAEQAPIA LVVTSDNVEV AQQYAEKTAE LLKTVEGATE IKLSSESGNP
EINVQIDRDK MAMLGLNIAT VGGTMRTAFN GNDDSKFRTG DSEYNINIVF EEGSRQSIDD
IENMMFINSV GQQVKLSQFA TIAYASGPTQ LERYDKSPSV TVQAQSVGRP TGTIVSEWKT
KIDQLEKPAN VHFVFTGDQE MQDEGFGTLF ISLFAAILLV YMVMVVLYDS FSRPFVVLFS
IPLSFIGALV ALALANMSLN IFTLLGIIML IGLVAKNAIM LVDFANHRKQ EGEDTVTALI
QANHARLRPI LMTTIAMVAG MIPLAIANGA GAEVNNGLAI VIIGGLISSL FLTLIVVPLV
YLIFDNIGRR FGKGTKTDYE KLMIADYEHR DIKGEHEV
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